ENSCSAG00000013334 (Chlorocebus sabaeus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCSAG00000013334 T208341_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 1.000
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 1.000
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 1.000
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 1.000
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.947
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.947
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.947
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.947
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.947
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.982
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.982
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.982
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.982
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.982
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.982
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.965
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000009495 Homeodomain 206 262

Links

Other Homeodomain family TFs
Other Chlorocebus sabaeus TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010206 Ailuropoda melanoleuca ENSAMEG00000010206 N
ENSAPLG00000013214 Anas platyrhynchos ENSAPLG00000013214 N
SALL3 Anolis carolinensis ENSACAG00000000478 N
SALL3 Callithrix jacchus ENSCJAG00000007332 N
SALL3 Canis familiaris ENSCAFG00000000013 N
SALL3 Cavia porcellus ENSCPOG00000008546 N
sall3b Danio rerio ENSDARG00000057586 N
sall3a Danio rerio ENSDARG00000079613 N
SALL3 Equus caballus ENSECAG00000015414 N
ENSFALG00000013343 Ficedula albicollis ENSFALG00000013343 N
ENSGMOG00000006649 Gadus morhua ENSGMOG00000006649 N
ENSGALG00000012657 Gallus gallus ENSGALG00000012657 N
sall3a Gasterosteus aculeatus ENSGACG00000005503 N
SALL3 Gorilla gorilla ENSGGOG00000008127 N
SALL3 Homo sapiens ENSG00000256463 N
ENSSTOG00000004145 Ictidomys tridecemlineatus ENSSTOG00000004145 N
ENSLOCG00000007831 Lepisosteus oculatus ENSLOCG00000007831 N
SALL3 Macaca mulatta ENSMMUG00000000286 N
SALL3 Meleagris gallopavo ENSMGAG00000002297 N
SALL3 Monodelphis domestica ENSMODG00000012231 N
ENSMPUG00000016646 Mustela putorius furo ENSMPUG00000016646 N
Sall3 Mus musculus ENSMUSG00000024565 N
ENSONIG00000007305 Oreochromis niloticus ENSONIG00000007305 N
SALL1 Ornithorhynchus anatinus ENSOANG00000013399 N
SALL3 Oryctolagus cuniculus ENSOCUG00000029398 N
sall3a Oryzias latipes ENSORLG00000020718 N
SALL3 Pan troglodytes ENSPTRG00000010126 N
ENSPANG00000006485 Papio anubis ENSPANG00000006485 N
ENSPSIG00000008556 Pelodiscus sinensis ENSPSIG00000008556 N
Pvit_05136 Pogona vitticeps Pvit_05136 N
ENSPPYG00000009253 Pongo abelii ENSPPYG00000009253 N
ENSSHAG00000015872 Sarcophilus harrisii ENSSHAG00000015872 N
sall3b Takifugu rubripes ENSTRUG00000003369 N
sall1a Takifugu rubripes ENSTRUG00000008950 N
SALL3 Tursiops truncatus ENSTTRG00000004958 N
ENSXMAG00000009081 Xiphophorus maculatus ENSXMAG00000009081 N