CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000019478
(
Chlorocebus sabaeus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCSAG00000019478
T208425_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DUX4
M08135_2.00
Homo sapiens
TAAYYYAATCA
TGATTRRRTTA
ChIP-seq
Mathelier et al.(2014)
MA0468.1
0.823
0.920
DUX4
M09167_2.00
Homo sapiens
TAAYYYAATCA
TGATTRRRTTA
Misc
Kulakovskiy et al.(2013)
DUX4_HUMAN.H11MO.0.A
0.823
0.920
DUX4
M10757_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUX4_01
0.823
0.920
DUX3_HUMAN
M10633_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUX3_01
0.714
0.804
DUX1_HUMAN
M10631_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUX1_01
0.712
0.830
DUX1_HUMAN
M10632_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUX1_02
0.712
0.830
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000018982
Homeodomain
20
76
RRRRLAWTPSQREALRACFERNPYPGIATREELARAIGMPEPRVQIWFQNERSRQLR
ENSCSAP00000018982
Homeodomain
95
149
RRKRTAVTRSQTALLLRAFQQDRFPGIATREELARETGLPESRIQIWFQNRRARH
Links
Other
Homeodomain
family TFs
Other
Chlorocebus sabaeus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_ABR058C
Ashbya gossypii
AGOS_ABR058C
I
Ecym_4579
Eremothecium cymbalariae
Ecym_4579
I
KAFR_0A02150
Kazachstania africana
KAFR_0A02150
I
KNAG_0M02140
Kazachstania naganishii
KNAG_0M02140
I
KLLA0_E07767g
Kluyveromyces lactis
KLLA0_E07767g
I
KLTH0D07964g
Kluyveromyces thermotolerans
KLTH0D07964g
I
Kwal_8219
Kluyveromyces waltii
Kwal_8219
I
PAS_chr3_0923
Komagataella pastoris
PAS_chr3_0923
I
SAKL0D13530g
Lachancea kluyveri
SAKL0D13530g
I
LALA0_S02e00540g
Lachancea lanzarotensis
LALA0_S02e00540g
I
KLTH0D07964g
Lachancea thermotolerans
KLTH0D07964g
I
NCAS_0A03700
Naumovozyma castellii
NCAS_0A03700
I
XP_002493160.1
Pichia pastoris
XP_002493160.1
I
SU7_2507
Saccharomyces arboricola
SU7_2507
I
17660_YMR021C
Saccharomyces bayanus
17660_YMR021C
I
Scas_Contig576.5
Saccharomyces castellii
Scas_Contig576.5
I
MAC1
Saccharomyces cerevisiae
YMR021C
D
16490_YMR021C
Saccharomyces mikatae
16490_YMR021C
I
17243_Multiple
Saccharomyces paradoxus
17243_Multiple
I
AACERI_AaceriABR058C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriABR058C
I
TPHA_0I02450
Tetrapisispora phaffii
TPHA_0I02450
I
TDEL_0B06560
Torulaspora delbrueckii
TDEL_0B06560
I
Kpol_1056p6
Vanderwaltozyma polyspora
Kpol_1056p6
I
BN7_1778
Wickerhamomyces ciferrii
BN7_1778
N
ZYRO0E06336g
Zygosaccharomyces rouxii
ZYRO0E06336g
I