ENSLACG00000006977 (Latimeria chalumnae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSLACG00000006977 T210793_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.777 0.543
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.777 0.543
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.777 0.543
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.777 0.543
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.777 0.543
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.777 0.543
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.777 0.543
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.777 0.543
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.777 0.543
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.734 0.391
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.734 0.391
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.734 0.391
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000007882 Homeodomain 138 183
ENSLACP00000007883 Homeodomain 114 159

Links

Other Homeodomain family TFs
Other Latimeria chalumnae TFs

1230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00078g84 Arthrobotrys oligospora AOL_s00078g84 N 0.000
BAUCODRAFT_42261 Baudoinia compniacensis BAUCODRAFT_42261 N 0.000
COCC4DRAFT_190319 Bipolaris maydis COCC4DRAFT_190319 N 0.000
COCMIDRAFT_89586 Bipolaris oryzae COCMIDRAFT_89586 N 0.000
COCSADRAFT_339916 Bipolaris sorokiniana COCSADRAFT_339916 N 0.000
COCVIDRAFT_94626 Bipolaris victoriae COCVIDRAFT_94626 N 0.000
COCCADRAFT_24165 Bipolaris zeicola COCCADRAFT_24165 N 0.000
Bcin01g06570 Botrytis cinerea Bcin01g06570 N 0.000
PVAR5_1950 Byssochlamys spectabilis PVAR5_1950 N 0.000
A1O1_05793 Capronia coronata A1O1_05793 N 0.000
A1O3_03567 Capronia epimyces A1O3_03567 N 0.000
PV04_01162 Capronia semiimmersa PV04_01162 N 0.000
Z519_09074 Cladophialophora bantiana Z519_09074 N 0.000
PV07_02098 Cladophialophora immunda PV07_02098 N 0.000
A1O5_06590 Cladophialophora psammophila A1O5_06590 N 0.000
estExt_Genewise1Plus.C_30684 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_30684 N 0.000
W97_03506 Coniosporium apollinis W97_03506 N 0.000
H072_5541 Dactylellina haptotyla H072_5541 N 0.000
DRE_05980 Drechslerella stenobrocha DRE_05980 N 0.000
PV11_07979 Exophiala sideris PV11_07979 N 0.000
PV08_05573 Exophiala spinifera PV08_05573 N 0.000
PV05_11914 Exophiala xenobiotica PV05_11914 N 0.000
Z517_07575 Fonsecaea pedrosoi Z517_07575 N 0.000
Z517_07750 Fonsecaea pedrosoi Z517_07750 N 0.000
LEMA_P026340.1 Leptosphaeria maculans LEMA_P026340.1 N 0.000
MPH_00536 Macrophomina phaseolina MPH_00536 N 0.000
e_gw1.7.638.1 Mycosphaerella fijiensis e_gw1.7.638.1 N 0.000
UCRNP2_4518 Neofusicoccum parvum UCRNP2_4518 N 0.000
OIDMADRAFT_179337 Oidiodendron maius OIDMADRAFT_179337 N 0.000
SNOG_04741 Phaeosphaeria nodorum SNOG_04741 N 0.000
MYCFIDRAFT_156359 Pseudocercospora fijiensis MYCFIDRAFT_156359 N 0.000
GMDG_00068 Pseudogymnoascus destructans GMDG_00068 N 0.000
PTT_10593 Pyrenophora teres PTT_10593 N 0.000
PTRG_07876 Pyrenophora triticirepentis PTRG_07876 N 0.000
Z518_04505 Rhinocladiella mackenziei Z518_04505 N 0.000
SBOR_0727 Sclerotinia borealis SBOR_0727 N 0.000
SETTUDRAFT_106188 Setosphaeria turcica SETTUDRAFT_106188 N 0.000
SEPMUDRAFT_148869 Sphaerulina musiva SEPMUDRAFT_148869 N 0.000
GSTUM_00010077001 Tuber melanosporum GSTUM_00010077001 N 0.000
PV09_01633 Verruconis gallopava PV09_01633 N 0.000
VDBG_03066 Verticillium albo atrum VDBG_03066 N 0.000
VDBG_03066 Verticillium alfalfae VDBG_03066 N 0.000