LHX4 (Ornithorhynchus anatinus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOANG00000000969 T212794_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.726 0.370
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.726 0.370
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.726 0.370
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.726 0.370
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.726 0.370
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.726 0.370
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.726 0.370
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.726 0.370
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.726 0.370
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.717 0.261
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.717 0.261
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.717 0.261
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000001534 Homeodomain 132 177

Links

Other Homeodomain family TFs
Other Ornithorhynchus anatinus TFs

1215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006567 Aedes aegypti AAEL006567 I 0.000
AALB008437 Anopheles albimanus AALB008437 N 0.000
AARA004781 Anopheles arabiensis AARA004781 N 0.000
AATE013597 Anopheles atroparvus AATE013597 N 0.000
ACHR003356 Anopheles christyi ACHR003356 N 0.000
ACOM037387 Anopheles coluzzii ACOM037387 N 0.000
ACUA011195 Anopheles culicifacies ACUA011195 N 0.000
ADAC004994 Anopheles darlingi ADAC004994 N 0.000
ADIR005830 Anopheles dirus ADIR005830 N 0.000
AEPI002581 Anopheles epiroticus AEPI002581 N 0.000
AFAF011251 Anopheles farauti AFAF011251 N 0.000
AFUN007742 Anopheles funestus AFUN007742 N 0.000
AGAP013301 Anopheles gambiae AGAP013301 N 0.000
AMAM016638 Anopheles maculatus AMAM016638 N 0.000
AMEC012788 Anopheles melas AMEC012788 N 0.000
AMEC018911 Anopheles melas AMEC018911 N 0.000
AMEM002981 Anopheles merus AMEM002981 N 0.000
AMIN003152 Anopheles minimus AMIN003152 N 0.000
AQUA000209 Anopheles quadriannulatus AQUA000209 N 0.000
ASIS002756 Anopheles sinensis ASIS002756 N 0.000
CpipJ_CPIJ015473 Culex pipiens CpipJ_CPIJ015473 I 0.000
CPIJ015473 Culex quinquefasciatus CPIJ015473 I 0.000
NV24716 Nasonia vitripennis NV24716 N 0.000