CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000014030
(
Pelodiscus sinensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSPSIG00000014030
T214943_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.735
0.405
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.735
0.405
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.735
0.405
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.735
0.405
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.657
0.459
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000015702
Homeodomain
138
161
KRIRTAFSPSQLLRLERGFGXXXX
ENSPSIP00000015702
Homeodomain
177
193
LAQVKVWFQNRRTKYKR
Links
Other
Homeodomain
family TFs
Other
Pelodiscus sinensis
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI007295
Acyrthosiphon pisum
ACYPI007295
N
AAEL006567
Aedes aegypti
AAEL006567
I
ENSAMEG00000007541
Ailuropoda melanoleuca
ENSAMEG00000007541
I
ENSAPLG00000003927
Anas platyrhynchos
ENSAPLG00000003927
I
Afo_R013625
Aptenodytes forsteri
Afo_R013625
I
ENSAMXG00000008763
Astyanax mexicanus
ENSAMXG00000008763
I
ENSAMXG00000020050
Astyanax mexicanus
ENSAMXG00000020050
I
BGIBMGA013173
Bombyx mori
BGIBMGA013173
N
ENSP00000384177-D1
Bos grunniens
ENSP00000384177-D1
I
MNT
Bos taurus
ENSBTAG00000025129
I
Brh_R005672
Buceros rhinoceros
Brh_R005672
I
MNT
Callithrix jacchus
ENSCJAG00000012389
I
Aan_R004293
Calypte anna
Aan_R004293
I
MNT
Canis familiaris
ENSCAFG00000019295
I
ENSCPOG00000014839
Cavia porcellus
ENSCPOG00000014839
I
ENSCSAG00000013771
Chlorocebus sabaeus
ENSCSAG00000013771
I
CpipJ_CPIJ015473
Culex pipiens
CpipJ_CPIJ015473
I
CPIJ015473
Culex quinquefasciatus
CPIJ015473
I
MNT
Danio rerio
ENSDARG00000101859
I
mntb
Danio rerio
ENSDARG00000073988
I
MNT
Dasypus novemcinctus
ENSDNOG00000040019
I
YQE_11244
Dendroctonus ponderosae
YQE_11244
N
MNT
Felis catus
ENSFCAG00000006315
I
ENSFALG00000004754
Ficedula albicollis
ENSFALG00000004754
I
ENSGMOG00000006979
Gadus morhua
ENSGMOG00000006979
I
ENSGMOG00000011558
Gadus morhua
ENSGMOG00000011558
I
MNT
Gallus gallus
ENSGALG00000005830
I
MNT
Gasterosteus aculeatus
ENSGACG00000008790
I
mntb
Gasterosteus aculeatus
ENSGACG00000020487
I
Gfo_R012737
Geospiza fortis
Gfo_R012737
I
MNT
Gorilla gorilla
ENSGGOG00000002455
I
HMEL003564
Heliconius melpomene
HMEL003564
N
MNT
Homo sapiens
ENSG00000070444
D
ENSSTOG00000026802
Ictidomys tridecemlineatus
ENSSTOG00000026802
I
ENSLACG00000018117
Latimeria chalumnae
ENSLACG00000018117
I
ENSLOCG00000004411
Lepisosteus oculatus
ENSLOCG00000004411
I
LDEC010970
Leptinotarsa decemlineata
LDEC010970
I
MNT
Macaca mulatta
ENSMMUG00000022004
I
ENSMEUG00000015884
Macropus eugenii
ENSMEUG00000015884
I
MNT
Meleagris gallopavo
ENSMGAG00000008592
I
MCINX010388
Melitaea cinxia
MCINX010388
N
ENSMPUG00000012867
Mustela putorius furo
ENSMPUG00000012867
I
Mnt
Mus musculus
ENSMUSG00000000282
D
Ogr16275
Ophisaurus gracilis
Ogr16275
I
ENSONIG00000008133
Oreochromis niloticus
ENSONIG00000008133
I
ENSONIG00000008731
Oreochromis niloticus
ENSONIG00000008731
I
MNT
Oryctolagus cuniculus
ENSOCUG00000016100
I
mntb
Oryzias latipes
ENSORLG00000002734
I
MNT
Oryzias latipes
ENSORLG00000007865
I
MNT
Otolemur garnettii
ENSOGAG00000004499
I
ENSOARG00000015698
Ovis aries
ENSOARG00000015698
I
MNT
Pan troglodytes
ENSPTRG00000008549
I
ENSPANG00000024466
Papio anubis
ENSPANG00000024466
I
ENSPSIG00000013581
Pelodiscus sinensis
ENSPSIG00000013581
I
ENSPFOG00000015158
Poecilia formosa
ENSPFOG00000015158
I
ENSPFOG00000010412
Poecilia formosa
ENSPFOG00000010412
I
Pvit_02549
Pogona vitticeps
Pvit_02549
I
MNT
Procavia capensis
ENSPCAG00000013160
I
ENSPVAG00000002166
Pteropus vampyrus
ENSPVAG00000002166
I
Mnt
Rattus norvegicus
ENSRNOG00000002894
I
Sakowv30028253m.g
Saccoglossus kowalevskii
Sakowv30028253m.g
I
ENSSHAG00000011999
Sarcophilus harrisii
ENSSHAG00000011999
N
SMAR003191
Strigamia maritima
SMAR003191
I
MNT
Taeniopygia guttata
ENSTGUG00000008774
I
MNT
Takifugu rubripes
ENSTRUG00000015800
I
mntb
Takifugu rubripes
ENSTRUG00000011273
I
MNT
Tetraodon nigroviridis
ENSTNIG00000005816
I
TC015361
Tribolium castaneum
TC015361
I
mnt.L
Xenopus laevis
XB-GENE-6087152
I
ENSXMAG00000011266
Xiphophorus maculatus
ENSXMAG00000011266
I
ENSXMAG00000008629
Xiphophorus maculatus
ENSXMAG00000008629
I
L798_06616
Zootermopsis nevadensis
L798_06616
N