ENSSTOG00000023408 (Ictidomys tridecemlineatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSSTOG00000023408 T216055_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000015790 Homeodomain 114 173

Links

Other Homeodomain family TFs
Other Ictidomys tridecemlineatus TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I
ENSAMXG00000021294 Astyanax mexicanus ENSAMXG00000021294 N
Brh_R009664 Buceros rhinoceros Brh_R009664 I
Aan_R011824 Calypte anna Aan_R011824 I
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I
nfkb2 Danio rerio ENSDARG00000038687 N
NFKB2 Gallus gallus ENSGALG00000005653 I
nfkb2 Gasterosteus aculeatus ENSGACG00000001323 N
NFKB1 Homo sapiens ENSG00000109320 D
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I
Ogr18048 Ophisaurus gracilis Ogr18048 I
ENSONIG00000007023 Oreochromis niloticus ENSONIG00000007023 N
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I
nfkb2 Oryzias latipes ENSORLG00000002942 N
ENSPFOG00000012589 Poecilia formosa ENSPFOG00000012589 N
NFKB1 Sus scrofa ENSSSCG00000030957 I
nfkb2 Takifugu rubripes ENSTRUG00000004360 N
nfkb2 Tetraodon nigroviridis ENSTNIG00000013359 N
ENSXMAG00000000193 Xiphophorus maculatus ENSXMAG00000000193 N