GH21899 (Drosophila grimshawi)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 FBgn0129360 T217817_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 1.000
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 1.000
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 1.000
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 1.000
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 1.000
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 0.947
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 0.947
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 0.947
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 0.947
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.930
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.930
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.930
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.930
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.930
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.930
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.930
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0155805 Homeodomain 157 213

Links

Other Homeodomain family TFs
Other Drosophila grimshawi TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_069570 Acremonium chrysogenum ACRE_069570 I
ARB_01788 Arthroderma benhamiae ARB_01788 I
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I
ATEG_04171 Aspergillus terreus CADATEAG00009984 D
BAUCODRAFT_120297 Baudoinia compniacensis BAUCODRAFT_120297 I
BBA_00148 Beauveria bassiana BBA_00148 I
BGHDH14_bgh01184 Blumeria graminis BGHDH14_bgh01184 I
Bcin01g06200 Botrytis cinerea Bcin01g06200 I
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I
A1O1_06861 Capronia coronata A1O1_06861 I
A1O3_10315 Capronia epimyces A1O3_10315 I
PV04_10601 Capronia semiimmersa PV04_10601 I
CTHT_0056810 Chaetomium thermophilum CTHT_0056810 I
Z519_06193 Cladophialophora bantiana Z519_06193 I
G647_08323 Cladophialophora carrionii G647_08323 I
PV07_12240 Cladophialophora immunda PV07_12240 I
A1O5_07631 Cladophialophora psammophila A1O5_07631 I
A1O7_09958 Cladophialophora yegresii A1O7_09958 I
CPUR_03335 Claviceps purpurea CPUR_03335 I
CFIO01_01433 Colletotrichum fioriniae CFIO01_01433 I
CGGC5_5664 Colletotrichum gloeosporioides CGGC5_5664 I
GLRG_04370 Colletotrichum graminicola GLRG_04370 I
CH063_05074 Colletotrichum higginsianum CH063_05074 I
Cob_03876 Colletotrichum orbiculare Cob_03876 I
CSUB01_02498 Colletotrichum sublineola CSUB01_02498 I
CCM_06184 Cordyceps militaris CCM_06184 I
fgenesh1_pm.C_scaffold_5000435 Cryphonectria parasitica fgenesh1_pm.C_scaffold_5000435 I
HMPREF1541_02811 Cyphellophora europaea HMPREF1541_02811 I
A1O9_06349 Exophiala aquamarina A1O9_06349 I
HMPREF1120_01778 Exophiala dermatitidis HMPREF1120_01778 I
PV10_01019 Exophiala mesophila PV10_01019 I
PV06_07195 Exophiala oligosperma PV06_07195 I
PV11_06012 Exophiala sideris PV11_06012 I
PV08_06661 Exophiala spinifera PV08_06661 I
PV05_02773 Exophiala xenobiotica PV05_02773 I
Z517_12283 Fonsecaea pedrosoi Z517_12283 I
FFUJ_01281 Fusarium fujikuroi FFUJ_01281 I
FGRRES_01100 Fusarium graminearum FGRRES_01100 D
FOXG_00297 Fusarium oxysporum FOXG_00297 I
FPSE_09056 Fusarium pseudograminearum FPSE_09056 I
NechaG98757 Fusarium solani NechaG98757 I
FVEG_01221 Fusarium verticillioides FVEG_01221 I
GGTG_12202 Gaeumannomyces graminis GGTG_12202 I
MGG_11712 Magnaporthe oryzae MGG_11712 I
MAPG_09676 Magnaporthe poae MAPG_09676 I
MBM_06173 Marssonina brunnea MBM_06173 I
MAC_05257 Metarhizium acridum MAC_05257 I
MAM_06825 Metarhizium album MAM_06825 I
MANI_109748 Metarhizium anisopliae MANI_109748 I
MBR_03692 Metarhizium brunneum MBR_03692 I
MGU_04884 Metarhizium guizhouense MGU_04884 I
MAJ_02218 Metarhizium majus MAJ_02218 I
X797_003774 Metarhizium robertsii X797_003774 I
MYCTH_2294145 Myceliophthora thermophila MYCTH_2294145 I
estExt_fgenesh1_kg.C_chr_160021 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_160021 I
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 I
NCU03266 Neurospora crassa NCU03266 D
estExt_fgenesh3_pm.C_70282 Neurospora discreta estExt_fgenesh3_pm.C_70282 I
NEUTE1DRAFT_133183 Neurospora tetrasperma NEUTE1DRAFT_133183 I
OIDMADRAFT_194382 Oidiodendron maius OIDMADRAFT_194382 I
F503_07224 Ophiostoma piceae uamh F503_07224 I
Pc18g00190 Penicillium chrysogenum Pc18g00190 I
PDIP_75510 Penicillium digitatum PDIP_75510 I
PEX1_077160 Penicillium expansum PEX1_077160 I
PITC_036250 Penicillium italicum PITC_036250 I
PDE_04931 Penicillium oxalicum PDE_04931 I
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I
U727_00433932271 Penicillium solitum U727_00433932271 I
PODANS_1_2230 Podospora anserina PODANS_1_2230 I
Z518_06261 Rhinocladiella mackenziei Z518_06261 I
SAPIO_CDS3097 Scedosporium apiospermum SAPIO_CDS3097 I
SBOR_0341 Sclerotinia borealis SBOR_0341 I
SS1G_04522 Sclerotinia sclerotiorum SS1G_04522 I
SMAC_02983 Sordaria macrospora SMAC_02983 I
SEPMUDRAFT_122411 Sphaerulina musiva SEPMUDRAFT_122411 I
SPPG_06166 Spizellomyces punctatus SPPG_06166 I
SPBR_06725 Sporothrix brasiliensis SPBR_06725 I
HMPREF1624_00506 Sporothrix schenckii HMPREF1624_00506 I
S40288_08800 Stachybotrys chartarum S40288_08800 I
S40285_01877 Stachybotrys chlorohalonata S40285_01877 I
L596_g25262 Steinernema carpocapsae L596_g25262 I
TSTA_096850 Talaromyces stipitatus TSTA_096850 I
THITE_2131584 Thielavia terrestris THITE_2131584 I
VHEMI06514 Torrubiella hemipterigena VHEMI06514 I
TRIREDRAFT_57059 Trichoderma reesei TRIREDRAFT_57059 I
TRIVIDRAFT_42882 Trichoderma virens TRIVIDRAFT_42882 I
H102_08770 Trichophyton rubrum H102_08770 I
H105_08795 Trichophyton soudanense H105_08795 I
UV8b_5567 Ustilaginoidea virens UV8b_5567 I
VDBG_05845 Verticillium albo atrum VDBG_05845 I
VDBG_05845 Verticillium alfalfae VDBG_05845 I
VDAG_03007 Verticillium dahliae VDAG_03007 I
Mycgr3G106635 Zymoseptoria tritici Mycgr3G106635 I