GB49751 (Apis mellifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GB49751 T218622_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 0.965
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 0.965
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 0.965
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 0.965
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.947
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.947
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.947
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.947
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.947
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.965
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.947
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.947
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.947
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.947
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.947
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.930
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB49751-PA Homeodomain 154 210

Links

Other Homeodomain family TFs
Other Apis mellifera TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10012804 Chelonia mydas Cmyd_10012804 N
Cmyd_10014903 Chelonia mydas Cmyd_10014903 N
Cmyd_10014771 Chelonia mydas Cmyd_10014771 N
Cmyd_10014427 Chelonia mydas Cmyd_10014427 N
Cmyd_10013937 Chelonia mydas Cmyd_10013937 N
Cmyd_10013772 Chelonia mydas Cmyd_10013772 N
Cmyd_10013046 Chelonia mydas Cmyd_10013046 N
Cmyd_10012986 Chelonia mydas Cmyd_10012986 N
Cmyd_10012830 Chelonia mydas Cmyd_10012830 N
Cmyd_10015037 Chelonia mydas Cmyd_10015037 N
Cmyd_10012695 Chelonia mydas Cmyd_10012695 N
Cmyd_10012472 Chelonia mydas Cmyd_10012472 N
Cmyd_10012340 Chelonia mydas Cmyd_10012340 N
Cmyd_10012141 Chelonia mydas Cmyd_10012141 N
Cmyd_10012053 Chelonia mydas Cmyd_10012053 N
Cmyd_10012049 Chelonia mydas Cmyd_10012049 N
Cmyd_10011918 Chelonia mydas Cmyd_10011918 N
Cmyd_10011536 Chelonia mydas Cmyd_10011536 N
Cmyd_10015203 Chelonia mydas Cmyd_10015203 N
Cmyd_10015316 Chelonia mydas Cmyd_10015316 N
Cmyd_10016076 Chelonia mydas Cmyd_10016076 N
Cmyd_10016112 Chelonia mydas Cmyd_10016112 N
Cmyd_10016495 Chelonia mydas Cmyd_10016495 N
Cmyd_10016498 Chelonia mydas Cmyd_10016498 N
Cmyd_10016549 Chelonia mydas Cmyd_10016549 N
Cmyd_10016989 Chelonia mydas Cmyd_10016989 N
Cmyd_10017127 Chelonia mydas Cmyd_10017127 N
Cmyd_10017310 Chelonia mydas Cmyd_10017310 N
Cmyd_10017755 Chelonia mydas Cmyd_10017755 N
Cmyd_10017906 Chelonia mydas Cmyd_10017906 N
Cmyd_10017938 Chelonia mydas Cmyd_10017938 N
Cmyd_10017985 Chelonia mydas Cmyd_10017985 N
Cmyd_10018053 Chelonia mydas Cmyd_10018053 N
Cmyd_10004410 Chelonia mydas Cmyd_10004410 N
Cmyd_10006722 Chelonia mydas Cmyd_10006722 N
Cmyd_10006667 Chelonia mydas Cmyd_10006667 N
Cmyd_10006621 Chelonia mydas Cmyd_10006621 N
Cmyd_10006184 Chelonia mydas Cmyd_10006184 N
Cmyd_10005732 Chelonia mydas Cmyd_10005732 N
Cmyd_10005354 Chelonia mydas Cmyd_10005354 N
Cmyd_10004763 Chelonia mydas Cmyd_10004763 N
Cmyd_10004478 Chelonia mydas Cmyd_10004478 N
Cmyd_10006724 Chelonia mydas Cmyd_10006724 N
Cmyd_10003654 Chelonia mydas Cmyd_10003654 N
Cmyd_10003504 Chelonia mydas Cmyd_10003504 N
Cmyd_10003439 Chelonia mydas Cmyd_10003439 N
Cmyd_10003232 Chelonia mydas Cmyd_10003232 N
Cmyd_10003126 Chelonia mydas Cmyd_10003126 N
Cmyd_10002130 Chelonia mydas Cmyd_10002130 N
Cmyd_10001989 Chelonia mydas Cmyd_10001989 N
Cmyd_10001489 Chelonia mydas Cmyd_10001489 N
Cmyd_10007153 Chelonia mydas Cmyd_10007153 N
Cmyd_10007273 Chelonia mydas Cmyd_10007273 N
Cmyd_10007297 Chelonia mydas Cmyd_10007297 N
Cmyd_10007685 Chelonia mydas Cmyd_10007685 N
Cmyd_10007900 Chelonia mydas Cmyd_10007900 N
Cmyd_10008315 Chelonia mydas Cmyd_10008315 N
Cmyd_10008565 Chelonia mydas Cmyd_10008565 N
Cmyd_10008690 Chelonia mydas Cmyd_10008690 N
Cmyd_10009304 Chelonia mydas Cmyd_10009304 N
Cmyd_10009364 Chelonia mydas Cmyd_10009364 N
Cmyd_10009391 Chelonia mydas Cmyd_10009391 N
Cmyd_10009634 Chelonia mydas Cmyd_10009634 N
Cmyd_10011031 Chelonia mydas Cmyd_10011031 N
Cmyd_10011070 Chelonia mydas Cmyd_10011070 N
Cmyd_10011123 Chelonia mydas Cmyd_10011123 N