GB51292 (Apis mellifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GB51292 T218633_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hoxa7
M00476_2.00 		Mus musculus
NNWAYNDNN
NNHNRTWNN		 PBM
Berger et al.(2008)
Hoxa7_2668 		0.862 0.982
Hoxa7
M00477_2.00 		Mus musculus
NYHHYNNNN
NNNNRDDRN		 PBM
Berger et al.(2008)
Hoxa7_3750 		0.862 0.982
HOXA7
M05069_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXA7_eDBD_HT-SELEX 		0.862 0.982
Antp
M06549_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0166.1 		0.862 0.982
Antp
M06374_2.00 		Drosophila melanogaster
YTTAATKA
TMATTAAR		 B1H
Zhu et al.(2011)
Antp_Cell_FBgn0000095 		0.862 0.982
Antp
M06375_2.00 		Drosophila melanogaster
WTAATW
AATTAW		 B1H
Zhu et al.(2011)
Antp_FlyReg_FBgn0000095 		0.862 0.982
Antp
M06376_2.00 		Drosophila melanogaster
NHTAATKR
YMATTADN		 B1H
Zhu et al.(2011)
Antp_SOLEXA_FBgn0000095 		0.862 0.982
Antp
M09682_2.00 		Drosophila melanogaster
TYTTWATKA
TMATWAARA		 Misc
Kulakovskiy et al.(2009)
Antp 		0.862 0.982
Antp
M10789_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ANTP_Q6_01 		0.862 0.982
HOXA7
M10679_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA7_01 		0.862 0.982
HOXA7
M05070_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_1 		0.862 0.982
HOXA7
M05071_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_2 		0.862 0.982
HOXB7
M00334_2.00 		Homo sapiens
NBRDNNN
NNNHYVN		 PBM
Barrera et al.(2016)
HOXB7_REF 		0.855 0.982
Hoxb7
M00481_2.00 		Mus musculus
NNWAYNDN
NHNRTWNN		 PBM
Berger et al.(2008)
Hoxb7_3953 		0.855 0.982
HOXB7
M05404_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXB7_eDBD_HT-SELEX 		0.855 0.982
HOXB7
M05407_2.00 		Homo sapiens
BBTAATTRCN
NGYAATTAVV		 SELEX
Yin et al.(2017)
HOXB7_FL_HT-SELEX 		0.855 0.982
HOXB7
M09166_2.00 		Homo sapiens
MATHAATCAW
WTGATTDATK		 Misc
Kulakovskiy et al.(2013)
HXB7_HUMAN.H11MO.0.C 		0.855 0.982
Hoxb7
M09206_2.00 		Mus musculus
MATHAATCAW
WTGATTDATK		 Misc
Kulakovskiy et al.(2013)
HXB7_MOUSE.H11MO.0.C 		0.855 0.982
HOXB7
M05405_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_1 		0.855 0.982
HOXB7
M05406_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_2 		0.855 0.982
HOXB7
M05408_2.00 		Homo sapiens
NNTAATKRCN
NGYMATTANN		 SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_1 		0.855 0.982
HOXB7
M05409_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_2 		0.855 0.982
HOXB7
M00333_2.00 		Homo sapiens
NHATWTATTN
NAATAWATDN		 PBM
Barrera et al.(2016)
HOXB7_R189C 		0.855 0.965
ftz
M03795_2.00 		Drosophila melanogaster
WTAATTRC
GYAATTAW		 SELEX
Nitta et al.(2015)
ftz_1 		0.836 0.860
ftz
M06488_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0225.1 		0.836 0.860
ftz
M06247_2.00 		Drosophila melanogaster
VTTAATKA
TMATTAAB		 B1H
Zhu et al.(2011)
Ftz_Cell_FBgn0001077 		0.836 0.860
ftz
M06248_2.00 		Drosophila melanogaster
TAATKRNH
DNYMATTA		 B1H
Zhu et al.(2011)
ftz_FlyReg_FBgn0001077 		0.836 0.860
ftz
M06249_2.00 		Drosophila melanogaster
BTAATKA
TMATTAV		 B1H
Zhu et al.(2011)
Ftz_SOLEXA_FBgn0001077 		0.836 0.860
ftz
M09679_2.00 		Drosophila melanogaster
YTAATKRNN
NNYMATTAR		 Misc
Kulakovskiy et al.(2009)
ftz 		0.836 0.860
ftz
M10787_2.00 		Drosophila melanogaster
CTTAATTRBHBB
VVDVYAATTAAG		 Transfac
Matys et al.(2006)
I$FTZ_01 		0.836 0.860
Hoxb6
M00381_2.00 		Mus musculus
NNDHNNN
NNNDHNN		 PBM
Berger et al.(2008)
Hoxb6_3428 		0.835 0.982
HOXB6
M04999_2.00 		Homo sapiens
NTAATKRY
RYMATTAN		 SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX 		0.835 0.982
HOXB6
M05000_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1 		0.835 0.982
HOXB6
M05001_2.00 		Homo sapiens
NTWATKRB
VYMATWAN		 SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2 		0.835 0.982
Hoxa6
M00494_2.00 		Mus musculus
NWWATKRNN
NNYMATWWN		 PBM
Berger et al.(2008)
Hoxa6_1040 		0.831 0.947
HOXA6
M04974_2.00 		Homo sapiens
NNTAATKRVN
NBYMATTANN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX 		0.831 0.947
HOXA6
M04975_2.00 		Homo sapiens
NNTAATKRBN
NVYMATTANN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1 		0.831 0.947
HOXA6
M04976_2.00 		Homo sapiens
NTAAYGRY
RYCRTTAN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2 		0.831 0.947
CBG00029
M01240_2.00 		Caenorhabditis briggsae
ATTAATTA
TAATTAAT		 PBM
Lambert et al.(2019)
pTH11471 		0.822 0.772
Hoxc6
M00392_2.00 		Mus musculus
TTAATTAB
VTAATTAA		 PBM
Berger et al.(2008)
Hoxc6_3954 		0.818 0.912
Hoxb8
M00517_2.00 		Mus musculus
NWWAYNDNN
NNHNRTWWN		 PBM
Berger et al.(2008)
Hoxb8_3780 		0.817 0.825
HOXB8
M05048_2.00 		Homo sapiens
NTAATKRM
KYMATTAN		 SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX 		0.817 0.825
HOXB8
M09141_2.00 		Homo sapiens
BMATHAATCAA
TTGATTDATKV		 Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C 		0.817 0.825
Hoxb8
M09214_2.00 		Mus musculus
BMATHAATCAA
TTGATTDATKV		 Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C 		0.817 0.825
HOXB8
M05049_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1 		0.817 0.825
HOXB8
M05050_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2 		0.817 0.825
HOXD8
M03221_2.00 		Homo sapiens
VHWAATKWDN
NHWMATTWDB		 SELEX
Jolma et al.(2013)
HOXD8_1 		0.817 0.807
HOXD8
M05310_2.00 		Homo sapiens
BTAATKRY
RYMATTAV		 SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX 		0.817 0.807
HOXD8
M05311_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1 		0.817 0.807
HOXD8
M05312_2.00 		Homo sapiens
NTWAYGRY
RYCRTWAN		 SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2 		0.817 0.807
abd-A
M03770_2.00 		Drosophila melanogaster
NNTAATKRCN
NGYMATTANN		 SELEX
Nitta et al.(2015)
abd-A_1 		0.810 0.912
abd-A
M03771_2.00 		Drosophila melanogaster
NNTAATKRCN
NGYMATTANN		 SELEX
Nitta et al.(2015)
abd-A_2 		0.810 0.912
abd-A
M06475_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0206.1 		0.810 0.912
abd-A
M06210_2.00 		Drosophila melanogaster
WTWATKDM
KHMATWAW		 B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014 		0.810 0.912
abd-A
M09671_2.00 		Drosophila melanogaster
HTAATKRH
DYMATTAD		 Misc
Kulakovskiy et al.(2009)
abd-A 		0.810 0.912
abd-A
M10778_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ABDA_Q6 		0.810 0.912
Ubx
M00558_2.00 		Drosophila melanogaster
NWWAYDDNN
NNHHRTWWN		 PBM
Busser et al.(2012a)
Ubx 		0.805 0.912
Ubx
M03804_2.00 		Drosophila melanogaster
NTAATKRH
DYMATTAN		 SELEX
Nitta et al.(2015)
Ubx_1 		0.805 0.912
Ubx
M06499_2.00 		Drosophila melanogaster
NTTAATKR
YMATTAAN		 B1H
Mathelier et al.(2014)
MA0094.2 		0.805 0.912
Ubx
M06273_2.00 		Drosophila melanogaster
NTTAATKR
YMATTAAN		 B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944 		0.805 0.912
Ubx
M06274_2.00 		Drosophila melanogaster
TAATKD
HMATTA		 B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944 		0.805 0.912
Ubx
M06275_2.00 		Drosophila melanogaster
NTTWATKR
YMATWAAN		 B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944 		0.805 0.912
Ubx
M09680_2.00 		Drosophila melanogaster
TTAATKR
YMATTAA		 Misc
Kulakovskiy et al.(2009)
Ubx 		0.805 0.912
Ubx
M10788_2.00 		Drosophila melanogaster
NNVNNNNTAATKRNBHNND
HNNDVNYMATTANNNNBNN		 Transfac
Matys et al.(2006)
I$UBX_01 		0.805 0.912
Hoxd8
M00436_2.00 		Mus musculus
NNWWYNNN
NNNRWWNN		 PBM
Berger et al.(2008)
Hoxd8_2644 		0.805 0.789
HOXB7
M00331_2.00 		Homo sapiens
NNNNNNY
RNNNNNN		 PBM
Barrera et al.(2016)
HOXB7_K191R 		0.798 0.965
Hoxc8
M00391_2.00 		Mus musculus
NNDNYNNNN
NNNNRNHNN		 PBM
Berger et al.(2008)
Hoxc8_3429 		0.784 0.807
HOXC8
M04912_2.00 		Homo sapiens
NYAATTRN
NYAATTRN		 SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX 		0.784 0.807
HOXC8
M10636_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXC8_Q3 		0.784 0.807
HOXC8
M04913_2.00 		Homo sapiens
NYMATKRN
NYMATKRN		 SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1 		0.784 0.807
HOXC8
M04914_2.00 		Homo sapiens
NTWAYGRY
RYCRTWAN		 SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2 		0.784 0.807
HOXB7
M00332_2.00 		Homo sapiens
NDWATATAYN
NRTATATWHN		 PBM
Barrera et al.(2016)
HOXB7_M190L 		0.779 0.965
egl-5
M09581_2.00 		Caenorhabditis elegans
DWTTWATGGS
SCCATWAAWH		 Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode 		0.750 0.579
CBG00023
M02062_2.00 		Caenorhabditis briggsae
NWWATKDNNN
NNNHMATWWN		 PBM
Weirauch et al.(2014)
pTH5778 		0.750 0.561
Q8I9J5_9BILA
M02214_2.00 		Spadella cephaloptera
NVTAWTWABN
NVTWAWTABN		 PBM
Weirauch et al.(2014)
pTH6164 		0.726 0.684
Scr
M03799_2.00 		Drosophila melanogaster
BTAATKRB
VYMATTAV		 SELEX
Nitta et al.(2015)
Scr_1 		0.703 0.930
Scr
M06496_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0203.1 		0.703 0.930
Scr
M06266_2.00 		Drosophila melanogaster
HVYTAATKA
TMATTARBD		 B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339 		0.703 0.930
Scr
M06267_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339 		0.703 0.930
Hoxa5
M00478_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Hoxa5_3415 		0.703 0.912
Hoxb5
M00480_2.00 		Mus musculus
NWDWTNNNN
NNNNAWHWN		 PBM
Berger et al.(2008)
Hoxb5_3122 		0.703 0.912
HOXB5
M03125_2.00 		Homo sapiens
NNKAATKRNN
NNYMATTMNN		 SELEX
Jolma et al.(2013)
HOXB5_1 		0.703 0.912
HOXA5
M04968_2.00 		Homo sapiens
STAATKRS
SYMATTAS		 SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX 		0.703 0.912
HOXA5
M04971_2.00 		Homo sapiens
NTMATKRB
VYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX 		0.703 0.912
HOXB5
M05051_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX 		0.703 0.912
HOXB5
M05054_2.00 		Homo sapiens
STMATKAB
VTMATKAS		 SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX 		0.703 0.912
HOXA5
M10652_2.00 		Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN		 Transfac
Matys et al.(2006)
V$HOX13_01 		0.703 0.912
HOXA5
M08457_2.00 		Homo sapiens
CDBWAATK
MATTWVHG		 COMPILED
Mathelier et al.(2014)
MA0158.1 		0.703 0.912
HOXA5
M04969_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1 		0.703 0.912
HOXA5
M04970_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2 		0.703 0.912
HOXA5
M04972_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1 		0.703 0.912
HOXA5
M04973_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2 		0.703 0.912
HOXB5
M05052_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1 		0.703 0.912
HOXB5
M05053_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2 		0.703 0.912
HOXB5
M05055_2.00 		Homo sapiens
NTMATKAB
VTMATKAN		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1 		0.703 0.912
HOXB5
M05056_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2 		0.703 0.912
Hoxc5
M00422_2.00 		Mus musculus
NWRATND
HNATYWN		 PBM
Berger et al.(2008)
Hoxc5_2630 		0.691 0.877
CBG23031
M01245_2.00 		Caenorhabditis briggsae
NTTWATKRNN
NNYMATWAAN		 PBM
Lambert et al.(2019)
pTH11458 		0.681 0.526
Hoxb4
M00479_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Hoxb4_2627 		0.662 0.877
HOXB4
M05343_2.00 		Homo sapiens
YTAATKAY
RTMATTAR		 SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX 		0.662 0.877
HOXB4
M09162_2.00 		Homo sapiens
YTAATKRS
SYMATTAR		 Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B 		0.662 0.877
Hoxb4
M09204_2.00 		Mus musculus
YTAATKRS
SYMATTAR		 Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A 		0.662 0.877
Hoxb4
M09576_2.00 		Mus musculus
TGATDRATKRSN
NSYMATYHATCA		 Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014 		0.662 0.877
HOXB4
M05344_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1 		0.662 0.877
HOXB4
M05345_2.00 		Homo sapiens
HTAAYKAB
VTMRTTAD		 SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2 		0.662 0.877
HOXC4
M00330_2.00 		Homo sapiens
YTAATTRB
VYAATTAR		 PBM
Barrera et al.(2016)
HOXC4_REF 		0.650 0.877
Hoxc4
M00530_2.00 		Mus musculus
NWAATNDNN
NNHNATTWN		 PBM
Berger et al.(2008)
Hoxc4_3491 		0.650 0.877
HOXC4
M05385_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX 		0.650 0.877
HOXC4
M05386_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1 		0.650 0.877
HOXC4
M05387_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2 		0.650 0.877
HOXC4
M00328_2.00 		Homo sapiens
YTAATTAB
VTAATTAR		 PBM
Barrera et al.(2016)
HOXC4_N178S 		0.650 0.860
Dfd
M03784_2.00 		Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB		 SELEX
Nitta et al.(2015)
Dfd_1 		0.648 0.860
Dfd
M03785_2.00 		Drosophila melanogaster
VYTAATKAYN
NRTMATTARB		 SELEX
Nitta et al.(2015)
Dfd_2 		0.648 0.860
Dfd
M06481_2.00 		Drosophila melanogaster
YTAATGA
TCATTAR		 B1H
Mathelier et al.(2014)
MA0186.1 		0.648 0.860
Dfd
M06226_2.00 		Drosophila melanogaster
VYTAATGA
TCATTAAB		 B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439 		0.648 0.860
Dfd
M06227_2.00 		Drosophila melanogaster
TTAATKRY
RYMATTAA		 B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439 		0.648 0.860
Dfd
M06228_2.00 		Drosophila melanogaster
NBTAATKR
YMATTAVN		 B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439 		0.648 0.860
Dfd
M09675_2.00 		Drosophila melanogaster
TTAATKRB
VYMATTAA		 Misc
Kulakovskiy et al.(2009)
Dfd 		0.648 0.860
Dfd
M10784_2.00 		Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN		 Transfac
Matys et al.(2006)
I$DFD_01 		0.648 0.860
HOXD4
M05273_2.00 		Homo sapiens
NTMATKRV
BYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX 		0.646 0.860
HOXD4
M05276_2.00 		Homo sapiens
NTAATKRB
VYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX 		0.646 0.860
HOXD4
M05274_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1 		0.646 0.860
HOXD4
M05275_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2 		0.646 0.860
HOXD4
M05277_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1 		0.646 0.860
HOXD4
M05278_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2 		0.646 0.860
Hoxa4
M00383_2.00 		Mus musculus
NTAATBDNN
NNHVATTAN		 PBM
Berger et al.(2008)
Hoxa4_3426 		0.646 0.842
HOXA4
M05381_2.00 		Homo sapiens
NTAATKRY
RYMATTAN		 SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX 		0.646 0.842
HOXA4
M10755_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA4_Q2 		0.646 0.842
HOXA4
M05382_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX 		0.646 0.842
SPU_026099
M02175_2.00 		Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM		 PBM
Weirauch et al.(2014)
pTH6140 		0.634 0.737
Pdx1
M00446_2.00 		Mus musculus
NWRAYNNN
NNNRTYWN		 PBM
Berger et al.(2008)
Ipf1_3815 		0.633 0.702
PDX1
M03155_2.00 		Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN		 SELEX
Jolma et al.(2013)
PDX1_1 		0.633 0.702
PDX1
M03156_2.00 		Homo sapiens
BTAATKRN
NYMATTAV		 SELEX
Jolma et al.(2013)
PDX1_2 		0.633 0.702
PDX1
M05161_2.00 		Homo sapiens
YTAATKRB
VYMATTAR		 SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX 		0.633 0.702
PDX1
M09147_2.00 		Homo sapiens
TGATWGATK
MATCWATCA		 Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A 		0.633 0.702
Pdx1
M09192_2.00 		Mus musculus
VYTAATGRB
VYCATTARB		 Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B 		0.633 0.702
Pdx1
M09571_2.00 		Mus musculus
TGATTRATKR
YMATYAATCA		 Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281 		0.633 0.702
PDX1
M10699_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_01 		0.633 0.702
PDX1
M10700_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_02 		0.633 0.702
PDX1
M10701_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_03 		0.633 0.702
PDX1
M10702_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_04 		0.633 0.702
PDX1
M10703_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_05 		0.633 0.702
PDX1
M10704_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q4_01 		0.633 0.702
PDX1
M10705_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q4 		0.633 0.702
PDX1
M10706_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q5_01 		0.633 0.702
PDX1
M10707_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q5 		0.633 0.702
PDX1
M10708_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IPF1_Q6 		0.633 0.702
PDX1
M05162_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1 		0.633 0.702
PDX1
M05163_2.00 		Homo sapiens
YTAATKRB
VYMATTAR		 SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2 		0.633 0.702
Q0N4M8_NEMVE
M02166_2.00 		Nematostella vectensis
HTAATKAC
GTMATTAD		 PBM
Weirauch et al.(2014)
pTH6215 		0.618 0.719
lin-39
M08211_2.00 		Caenorhabditis elegans
GATTGATG
CATCAATC		 ChIP-seq
Contrino et al.(2012)
Mw154 		0.618 0.754
lin-39
M09582_2.00 		Caenorhabditis elegans
DTGATWRATK
MATYWATCAH		 Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode 		0.618 0.754
Hoxd3
M00531_2.00 		Mus musculus
NTAATNDN
NHNATTAN		 PBM
Berger et al.(2008)
Hoxd3_1742 		0.618 0.719
Hoxa3
M00172_2.00 		Mus musculus
NTAATKRNNN
NNNYMATTAN		 PBM
Badis et al.(2009)
Hoxa3_2783 		0.618 0.719
Hoxa3
M00532_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxa3_2783 		0.618 0.719
Hoxd3
M03287_2.00 		Mus musculus
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
Hoxd3_1 		0.618 0.719
HOXD3
M05101_2.00 		Homo sapiens
CTAATTAS
STAATTAG		 SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX 		0.618 0.719
HOXA3
M10651_2.00 		Homo sapiens
SVTWNDDKB
VMHHNWABS		 Transfac
Matys et al.(2006)
V$HOXA3_01 		0.618 0.719
HOXD3
M05102_2.00 		Homo sapiens
YTAAYGAY
RTCRTTAR		 SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1 		0.618 0.719
HOXD3
M05103_2.00 		Homo sapiens
CTAATKAC
GTMATTAG		 SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2 		0.618 0.719
Hoxb3
M00504_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxb3_1720 		0.618 0.702
HOXB3
M03126_2.00 		Homo sapiens
NBTAATKRNN
NNYMATTAVN		 SELEX
Jolma et al.(2013)
HOXB3_1 		0.618 0.702
HOXC4
M00329_2.00 		Homo sapiens
NTAATKRNN
NNYMATTAN		 PBM
Barrera et al.(2016)
HOXC4_R158L 		0.618 0.860
zen
M03805_2.00 		Drosophila melanogaster
BTAATKRB
VYMATTAV		 SELEX
Nitta et al.(2015)
zen_1 		0.617 0.649
zen
M06500_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0256.1 		0.617 0.649
zen
M06276_2.00 		Drosophila melanogaster
NBYTAATKA
TMATTARBN		 B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053 		0.617 0.649
zen
M06277_2.00 		Drosophila melanogaster
AANWTWAWTG
CAWTWAWNTT		 B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053 		0.617 0.649
zen
M06278_2.00 		Drosophila melanogaster
NYTAATKA
TMATTARN		 B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053 		0.617 0.649
zen2
M02118_2.00 		Drosophila melanogaster
NNTAATKRNN
NNYMATTANN		 PBM
Weirauch et al.(2014)
pTH5479 		0.616 0.649
zen2
M03806_2.00 		Drosophila melanogaster
BTAATKAS
STMATTAV		 SELEX
Nitta et al.(2015)
zen2_1 		0.616 0.649
zen2
M03807_2.00 		Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV
BTAATKWNNVRNNNNYBNNWMATTAV		 SELEX
Nitta et al.(2015)
zen2_2 		0.616 0.649
zen2
M06501_2.00 		Drosophila melanogaster
BTAATKA
TMATTAV		 B1H
Mathelier et al.(2014)
MA0257.1 		0.616 0.649
zen2
M06279_2.00 		Drosophila melanogaster
HNBTAATKA
TMATTAVND		 B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054 		0.616 0.649
zen2
M06280_2.00 		Drosophila melanogaster
NNNTAATKRN
NYMATTANNN		 B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054 		0.616 0.649
zen2
M06281_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054 		0.616 0.649
Q9GP48_9TURB
M02217_2.00 		Discocelis tigrina
DTAATTAB
VTAATTAH		 PBM
Weirauch et al.(2014)
pTH6515 		0.606 0.596
Q24780_9CNID
M02205_2.00 		Eleutheria dichotoma
NNYTAATTAMN
NKTAATTARNN		 PBM
Weirauch et al.(2014)
pTH6308 		0.601 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB51292-PA Homeodomain 271 327

Links

Other Homeodomain family TFs
Other Apis mellifera TFs

1849 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_052720 Acremonium chrysogenum ACRE_052720 I
AOL_s00215g441 Arthrobotrys oligospora AOL_s00215g441 I
ARB_03330 Arthroderma benhamiae ARB_03330 I
fgenesh1_pm.00710_#_124 Aspergillus carbonarius fgenesh1_pm.00710_#_124 I
ACLA_016290 Aspergillus clavatus CADACLAG00001582 I
CADAFLAG00009131 Aspergillus flavus CADAFLAG00009131 I
AFUA_5G13310 Aspergillus fumigatus CADAFUAG00006042 I
ANIA_06889 Aspergillus nidulans CADANIAG00007690 I
CADANGAG00011408 Aspergillus niger CADANGAG00011408 I
CADAORAG00011593 Aspergillus oryzae CADAORAG00011593 I
ATEG_06183 Aspergillus terreus CADATEAG00001886 I
M437DRAFT_57951 Aureobasidium melanogenum M437DRAFT_57951 I
M438DRAFT_333229 Aureobasidium pullulans M438DRAFT_333229 I
AUEXF2481DRAFT_2214 Aureobasidium subglaciale AUEXF2481DRAFT_2214 I
BAUCODRAFT_31811 Baudoinia compniacensis BAUCODRAFT_31811 I
BBA_03744 Beauveria bassiana BBA_03744 I
COCC4DRAFT_172749 Bipolaris maydis COCC4DRAFT_172749 I
COCMIDRAFT_27930 Bipolaris oryzae COCMIDRAFT_27930 I
COCSADRAFT_141952 Bipolaris sorokiniana COCSADRAFT_141952 I
COCVIDRAFT_100340 Bipolaris victoriae COCVIDRAFT_100340 I
COCCADRAFT_109263 Bipolaris zeicola COCCADRAFT_109263 I
BDDG_03909 Blastomyces dermatitidis BDDG_03909 I
BDDG_07330 Blastomyces dermatitidis BDDG_07330 I
BGHDH14_bgh04346 Blumeria graminis BGHDH14_bgh04346 I
Bcin08g04710 Botrytis cinerea Bcin08g04710 I
PVAR5_1796 Byssochlamys spectabilis PVAR5_1796 I
CHGG_03119 Chaetomium globosum CHGG_03119 I
CTHT_0026520 Chaetomium thermophilum CTHT_0026520 I
CPUR_00998 Claviceps purpurea CPUR_00998 I
CIMG_09377 Coccidioides immitis CIMG_09377 I
CIMG_09809 Coccidioides immitis CIMG_09809 I
CPC735_017550 Coccidioides posadasii CPC735_017550 I
CPC735_022740 Coccidioides posadasii CPC735_022740 I
estExt_fgenesh1_pg.C_180221 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_180221 I
CFIO01_07206 Colletotrichum fioriniae CFIO01_07206 I
CGGC5_9480 Colletotrichum gloeosporioides CGGC5_9480 I
GLRG_00439 Colletotrichum graminicola GLRG_00439 I
CH063_11861 Colletotrichum higginsianum CH063_11861 I
CH063_15177 Colletotrichum higginsianum CH063_15177 I
Cob_05363 Colletotrichum orbiculare Cob_05363 I
CSUB01_08637 Colletotrichum sublineola CSUB01_08637 I
W97_09318 Coniosporium apollinis W97_09318 I
CCM_09455 Cordyceps militaris CCM_09455 I
estExt_Genewise1Plus.C_12014 Cryphonectria parasitica estExt_Genewise1Plus.C_12014 I
H072_3292 Dactylellina haptotyla H072_3292 I
DOTSEDRAFT_41728 Dothistroma septosporum DOTSEDRAFT_41728 I
EPUS_05568 Endocarpon pusillum EPUS_05568 I
EV44_g2662 Erysiphe necator EV44_g2662 I
FFUJ_09555 Fusarium fujikuroi FFUJ_09555 I
FGRRES_04109 Fusarium graminearum FGRRES_04109 D
FOXG_11527 Fusarium oxysporum FOXG_11527 I
FPSE_00129 Fusarium pseudograminearum FPSE_00129 I
NechaG100921 Fusarium solani NechaG100921 I
FVEG_10296 Fusarium verticillioides FVEG_10296 I
GGTG_01006 Gaeumannomyces graminis GGTG_01006 I
CMQ_3221 Grosmannia clavigera CMQ_3221 I
HCBG_01563 Histoplasma capsulatum HCBG_01563 I
HCBG_06235 Histoplasma capsulatum HCBG_06235 I
LEMA_P107540.1 Leptosphaeria maculans LEMA_P107540.1 I
MGG_15139 Magnaporthe oryzae MGG_15139 I
MBM_01117 Marssonina brunnea MBM_01117 I
MAC_01643 Metarhizium acridum MAC_01643 I
MAM_00184 Metarhizium album MAM_00184 I
MANI_117820 Metarhizium anisopliae MANI_117820 I
MBR_02809 Metarhizium brunneum MBR_02809 I
MGU_00202 Metarhizium guizhouense MGU_00202 I
MAJ_02389 Metarhizium majus MAJ_02389 I
X797_000863 Metarhizium robertsii X797_000863 I
MCYG_03949 Microsporum canis MCYG_03949 I
MGYG_07702 Microsporum gypseum MGYG_07702 I
estExt_Genewise1.C_160684 Mycosphaerella fijiensis estExt_Genewise1.C_160684 I
estExt_fgenesh1_pg.C_chr_100274 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_100274 I
estExt_fgenesh1_pg.C_sca_20_chr6_4_00369 Nectria haematococca estExt_fgenesh1_pg.C_sca_20_chr6_4_00369 I
UCRNP2_8934 Neofusicoccum parvum UCRNP2_8934 I
NFIA_073730 Neosartorya fischeri CADNFIAG00007209 I
NCU00445 Neurospora crassa NCU00445 D
estExt_fgenesh2_pg.C_50201 Neurospora discreta estExt_fgenesh2_pg.C_50201 I
NEUTE1DRAFT_146594 Neurospora tetrasperma NEUTE1DRAFT_146594 I
OIDMADRAFT_157493 Oidiodendron maius OIDMADRAFT_157493 I
F503_04589 Ophiostoma piceae uamh F503_04589 I
PABG_07603 Paracoccidioides brasiliensis PABG_07603 I
PAAG_05555 Paracoccidioides sp lutzii PAAG_05555 I
Pc21g03530 Penicillium chrysogenum Pc21g03530 I
PMAA_034090 Penicillium marneffei PMAA_034090 I
PDE_07343 Penicillium oxalicum PDE_07343 I
PCH_Pc21g03530 Penicillium rubens PCH_Pc21g03530 I
U727_0043014751 Penicillium solitum U727_0043014751 I
PFICI_12447 Pestalotiopsis fici PFICI_12447 I
PODANS_7_6620 Podospora anserina PODANS_7_6620 I
MYCFIDRAFT_52991 Pseudocercospora fijiensis MYCFIDRAFT_52991 I
GMDG_01671 Pseudogymnoascus destructans GMDG_01671 I
V499_02322 Pseudogymnoascus pannorum V499_02322 I
PTT_20177 Pyrenophora teres PTT_20177 I
PTRG_05544 Pyrenophora triticirepentis PTRG_05544 I
SBOR_3221 Sclerotinia borealis SBOR_3221 I
SMAC_01881 Sordaria macrospora SMAC_01881 I
SEPMUDRAFT_147002 Sphaerulina musiva SEPMUDRAFT_147002 I
SPBR_05123 Sporothrix brasiliensis SPBR_05123 I
HMPREF1624_04820 Sporothrix schenckii HMPREF1624_04820 I
S40288_04720 Stachybotrys chartarum S40288_04720 I
S40285_07798 Stachybotrys chlorohalonata S40285_07798 I
PMAA_034090 Talaromyces marneffei PMAA_034090 I
TSTA_063500 Talaromyces stipitatus TSTA_063500 I
THITE_2118415 Thielavia terrestris THITE_2118415 I
UCRPA7_8320 Togninia minima UCRPA7_8320 I
VHEMI07768 Torrubiella hemipterigena VHEMI07768 I
TRIATDRAFT_291718 Trichoderma atroviride TRIATDRAFT_291718 I
TRIREDRAFT_59067 Trichoderma reesei TRIREDRAFT_59067 I
TRIVIDRAFT_10694 Trichoderma virens TRIVIDRAFT_10694 I
TEQG_03363 Trichophyton equinum TEQG_03363 I
H101_07533 Trichophyton interdigitale H101_07533 I
TESG_04869 Trichophyton tonsurans TESG_04869 I
GSTUM_00004569001 Tuber melanosporum GSTUM_00004569001 I
UREG_04936 Uncinocarpus reesii UREG_04936 I
UV8b_2527 Ustilaginoidea virens UV8b_2527 I
VDBG_07828 Verticillium albo atrum VDBG_07828 I
VDBG_07828 Verticillium alfalfae VDBG_07828 I
VDAG_09694 Verticillium dahliae VDAG_09694 I
Mycgr3G111074 Zymoseptoria tritici Mycgr3G111074 I