CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCBG_03004
(
Histoplasma capsulatum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
HCBG_03004
T219322_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN
NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.809
0.877
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR
YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.613
0.456
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR
YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.613
0.456
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.613
0.456
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.613
0.456
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEH09467
Homeodomain
53
109
RQKRRRTSPDDQKILEAEYQRNPKPDRATRADIVNRVTLGEKEVQIWFQNRRQNDRR
Links
Other
Homeodomain
family TFs
Other
Histoplasma capsulatum
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00260.1
Alternaria brassicicola
AB00260.1
I
0.782
AOL_s00075g18
Arthrobotrys oligospora
AOL_s00075g18
I
0.690
fgenesh1_pm.00866_#_491
Aspergillus carbonarius
fgenesh1_pm.00866_#_491
I
0.804
ACLA_040020
Aspergillus clavatus
CADACLAG00003199
I
0.809
CADAFLAG00002414
Aspergillus flavus
CADAFLAG00002414
I
0.809
CADANGAG00002342
Aspergillus niger
CADANGAG00002342
I
0.809
CADAORAG00001369
Aspergillus oryzae
CADAORAG00001369
I
0.809
EURHEDRAFT_516147
Aspergillus ruber
EURHEDRAFT_516147
I
0.809
ATEG_04171
Aspergillus terreus
CADATEAG00009984
D
0.809
M437DRAFT_82573
Aureobasidium melanogenum
M437DRAFT_82573
I
0.772
M438DRAFT_345498
Aureobasidium pullulans
M438DRAFT_345498
I
0.772
AUEXF2481DRAFT_40998
Aureobasidium subglaciale
AUEXF2481DRAFT_40998
I
0.772
COCC4DRAFT_127765
Bipolaris maydis
COCC4DRAFT_127765
I
0.777
COCMIDRAFT_2266
Bipolaris oryzae
COCMIDRAFT_2266
I
0.777
COCSADRAFT_125307
Bipolaris sorokiniana
COCSADRAFT_125307
I
0.777
COCVIDRAFT_88516
Bipolaris victoriae
COCVIDRAFT_88516
I
0.777
COCCADRAFT_90442
Bipolaris zeicola
COCCADRAFT_90442
I
0.777
BDDG_04023
Blastomyces dermatitidis
BDDG_04023
I
0.853
PVAR5_3236
Byssochlamys spectabilis
PVAR5_3236
I
0.803
CaO19.7017
Candida albicans
CaO19.7017
I
0.601
CD36_70900
Candida dubliniensis
CD36_70900
I
0.601
CAGL0G07249g
Candida glabrata
CAGL0G07249g
I
0.608
PGUG_00382
Candida guilliermondii
PGUG_00382
I
0.602
CLUG_04271
Candida lusitaniae
CLUG_04271
I
0.624
G210_2310
Candida maltosa
G210_2310
I
0.601
CORT_0H00310
Candida orthopsilosis
CORT_0H00310
I
0.601
CPAG_00635
Candida parapsilosis
CPAG_00635
I
0.601
CANTEDRAFT_113041
Candida tenuis
CANTEDRAFT_113041
I
0.601
CTRG_04888
Candida tropicalis
CTRG_04888
I
0.601
A1O1_06861
Capronia coronata
A1O1_06861
I
0.724
A1O3_10315
Capronia epimyces
A1O3_10315
I
0.724
PV04_10601
Capronia semiimmersa
PV04_10601
I
0.735
Z519_06193
Cladophialophora bantiana
Z519_06193
I
0.735
G647_08323
Cladophialophora carrionii
G647_08323
I
0.724
A1O5_07631
Cladophialophora psammophila
A1O5_07631
I
0.735
A1O7_09958
Cladophialophora yegresii
A1O7_09958
I
0.724
CLUG_04271
Clavispora lusitaniae
CLUG_04271
I
0.624
CIMG_09634
Coccidioides immitis
CIMG_09634
I
0.780
CPC735_023880
Coccidioides posadasii
CPC735_023880
I
0.780
estExt_Genewise1.C_11468
Cochliobolus heterostrophus C5
estExt_Genewise1.C_11468
I
0.777
H072_1197
Dactylellina haptotyla
H072_1197
I
0.708
DEHA2F22286g
Debaryomyces hansenii
DEHA2F22286g
I
0.601
DOTSEDRAFT_142040
Dothistroma septosporum
DOTSEDRAFT_142040
I
0.763
DRE_07453
Drechslerella stenobrocha
DRE_07453
I
0.712
EPUS_07220
Endocarpon pusillum
EPUS_07220
I
0.792
A1O9_06349
Exophiala aquamarina
A1O9_06349
I
0.715
HMPREF1120_01778
Exophiala dermatitidis
HMPREF1120_01778
I
0.724
Z517_12283
Fonsecaea pedrosoi
Z517_12283
I
0.740
KAFR_0C05600
Kazachstania africana
KAFR_0C05600
I
0.625
KNAG_0B03460
Kazachstania naganishii
KNAG_0B03460
I
0.635
KLLA0_B01584g
Kluyveromyces lactis
KLLA0_B01584g
I
0.640
KLTH0G04686g
Kluyveromyces thermotolerans
KLTH0G04686g
I
0.625
Kwal_18450
Kluyveromyces waltii
Kwal_18450
I
0.625
KUCA_T00000773001
Kuraishia capsulata
KUCA_T00000773001
I
0.647
LALA0_S09e00364g
Lachancea lanzarotensis
LALA0_S09e00364g
I
0.613
KLTH0G04686g
Lachancea thermotolerans
KLTH0G04686g
I
0.625
LEMA_P079180.1
Leptosphaeria maculans
LEMA_P079180.1
I
0.777
LELG_05443
Lodderomyces elongisporus
LELG_05443
I
0.601
MPH_01872
Macrophomina phaseolina
MPH_01872
I
0.834
PGUG_00382
Meyerozyma guilliermondii
PGUG_00382
I
0.602
MCYG_03024
Microsporum canis
MCYG_03024
I
0.775
MGYG_00197
Microsporum gypseum
MGYG_00197
I
0.775
NCAS_0H02770
Naumovozyma castellii
NCAS_0H02770
I
0.600
HPODL_02118
Ogataea parapolymorpha
HPODL_02118
I
0.601
PABG_04211
Paracoccidioides brasiliensis
PABG_04211
I
0.866
PAAG_11867
Paracoccidioides sp lutzii
PAAG_11867
I
0.866
Pc18g00190
Penicillium chrysogenum
Pc18g00190
I
0.799
PDIP_75510
Penicillium digitatum
PDIP_75510
I
0.799
PEX1_077160
Penicillium expansum
PEX1_077160
I
0.804
PITC_036250
Penicillium italicum
PITC_036250
I
0.804
PMAA_076490
Penicillium marneffei
PMAA_076490
I
0.792
PDE_04931
Penicillium oxalicum
PDE_04931
I
0.804
PCH_Pc18g00190
Penicillium rubens
PCH_Pc18g00190
I
0.799
U727_00433932271
Penicillium solitum
U727_00433932271
I
0.804
SNOG_10542
Phaeosphaeria nodorum
SNOG_10542
I
0.778
JL09_g4323
Pichia kudriavzevii
JL09_g4323
I
0.623
estExt_fgenesh1_pm.C_chr_5.10316
Pichia stipitis
estExt_fgenesh1_pm.C_chr_5.10316
I
0.601
GMDG_01589
Pseudogymnoascus destructans
GMDG_01589
I
0.825
V499_00333
Pseudogymnoascus pannorum
V499_00333
I
0.825
Z518_06261
Rhinocladiella mackenziei
Z518_06261
I
0.723
SU7_2475
Saccharomyces arboricola
SU7_2475
I
0.613
Scas_Contig641.12
Saccharomyces castellii
Scas_Contig641.12
I
0.600
YOX1
Saccharomyces cerevisiae
YML027W
D
0.613
17440_YML027W
Saccharomyces paradoxus
17440_YML027W
I
0.613
PICST_65833
Scheffersomyces stipitis
PICST_65833
I
0.601
SETTUDRAFT_126230
Setosphaeria turcica
SETTUDRAFT_126230
I
0.777
SPAPADRAFT_57590
Spathaspora passalidarum
SPAPADRAFT_57590
I
0.601
SEPMUDRAFT_122411
Sphaerulina musiva
SEPMUDRAFT_122411
I
0.616
SPPG_01429
Spizellomyces punctatus
SPPG_01429
I
0.634
SNOG_10542
Stagonospora nodorum
SNOG_10542
I
0.778
PMAA_076490
Talaromyces marneffei
PMAA_076490
I
0.792
TSTA_096850
Talaromyces stipitatus
TSTA_096850
I
0.803
TBLA_0E02960
Tetrapisispora blattae
TBLA_0E02960
I
0.614
TPHA_0D02630
Tetrapisispora phaffii
TPHA_0D02630
I
0.617
THITE_2131584
Thielavia terrestris
THITE_2131584
I
0.600
TDEL_0A04320
Torulaspora delbrueckii
TDEL_0A04320
I
0.625
TEQG_06412
Trichophyton equinum
TEQG_06412
I
0.775
H101_06850
Trichophyton interdigitale
H101_06850
I
0.775
H102_08770
Trichophyton rubrum
H102_08770
I
0.775
H105_08795
Trichophyton soudanense
H105_08795
I
0.775
TESG_00798
Trichophyton tonsurans
TESG_00798
I
0.775
GSTUM_00011138001
Tuber melanosporum
GSTUM_00011138001
I
0.676
M407DRAFT_21315
Tulasnella calospora
M407DRAFT_21315
I
0.625
UREG_04594
Uncinocarpus reesii
UREG_04594
I
0.780
UV8b_5567
Ustilaginoidea virens
UV8b_5567
I
0.629
Kpol_1004p50
Vanderwaltozyma polyspora
Kpol_1004p50
I
0.631
Kpol_1023p80
Vanderwaltozyma polyspora
Kpol_1023p80
I
0.613
PV09_05311
Verruconis gallopava
PV09_05311
I
0.724
J056_000182
Wallemia ichthyophaga
J056_000182
I
0.636
BN7_6497
Wickerhamomyces ciferrii
BN7_6497
I
0.633
YALI0_E20449g
Yarrowia lipolytica
YALI0_E20449g
I
0.606
ZBAI_03698
Zygosaccharomyces bailii
ZBAI_03698
I
0.609
ZBAI_09382
Zygosaccharomyces bailii
ZBAI_09382
I
0.609
ZYRO0D13596g
Zygosaccharomyces rouxii
ZYRO0D13596g
I
0.609