CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_258951
(
Serendipita vermifera
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
M408DRAFT_258951
T220332_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAD26261
M02055_2.00
Encephalitozoon cuniculi
NNYAATWWA
TWWATTRNN
PBM
Weirauch et al.(2014)
pTH6363
0.799
0.719
NEMVEDRAFT_v1g105595
M02143_2.00
Nematostella vectensis
NTWATWRN
NYWATWAN
PBM
Weirauch et al.(2014)
pTH5503
0.639
0.439
UM04928
M02178_2.00
Ustilago maydis
NNNHMATHHN
NDDATKDNNN
PBM
Weirauch et al.(2014)
pTH5932
0.602
0.491
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM31409
Homeodomain
64
120
VKHRKRTTRQQLKVLEDTFRTTQKPDGNVRKSLALQLNMTPRNVQVWFQNRRAKDKT
Links
Other
Homeodomain
family TFs
Other
Serendipita vermifera
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_192725
Agaricus bisporus
AGABI2DRAFT_192725
I
0.643
M378DRAFT_8263
Amanita muscaria
M378DRAFT_8263
I
0.812
H311_05138
Anncaliia algerae
H311_05138
I
0.750
BOTBODRAFT_214576
Botryobasidium botryosum
BOTBODRAFT_214576
I
0.734
CERSUDRAFT_94820
Ceriporiopsis subvermispora
CERSUDRAFT_94820
I
0.649
CC1G_01962
Coprinopsis cinerea
CC1G_01962
I
0.805
L804_00025
Cryptococcus gattii
L804_00025
I
0.636
CNJ00280
Cryptococcus neoformans
CNJ00280
I
0.636
warA
Dictyostelium discoideum
DDB_G0291075
I
0.711
estExt_fgeneshDP_pg.C_350041
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_350041
I
0.711
EDEG_01594
Edhazardia aedis
EDEG_01594
I
0.660
CAD26261
Encephalitozoon cuniculi
CAD26261
D
0.799
EHEL_031090
Encephalitozoon hellem
EHEL_031090
I
0.799
Eint_031070
Encephalitozoon intestinalis
Eint_031070
I
0.788
EROM_031050
Encephalitozoon romaleae
EROM_031050
I
0.799
FOMPIDRAFT_1128018
Fomitopsis pinicola
FOMPIDRAFT_1128018
I
0.729
GALMADRAFT_211191
Galerina marginata
GALMADRAFT_211191
I
0.782
GLOTRDRAFT_92391
Gloeophyllum trabeum
GLOTRDRAFT_92391
I
0.688
M413DRAFT_413744
Hebeloma cylindrosporum
M413DRAFT_413744
I
0.771
JAAARDRAFT_47621
Jaapia argillacea
JAAARDRAFT_47621
I
0.807
KNAG_0A05600
Kazachstania naganishii
KNAG_0A05600
I
0.621
K443DRAFT_127593
Laccaria amethystina
K443DRAFT_127593
I
0.782
LACBIDRAFT_293988
Laccaria bicolor
LACBIDRAFT_293988
I
0.782
MELLADRAFT_35504
Melampsora laricipopulina
MELLADRAFT_35504
I
0.620
MVLG_00113
Microbotryum violaceum
MVLG_00113
I
0.678
MVLG_02963
Microbotryum violaceum
MVLG_02963
I
0.663
E5Q_03771
Mixia osmundae
E5Q_03771
I
0.600
E5Q_01806
Mixia osmundae
E5Q_01806
I
0.677
Moror_6758
Moniliophthora roreri
Moror_6758
I
0.805
fgeneshMC_pg.1_#_125
Mucor circinelloides
fgeneshMC_pg.1_#_125
I
0.688
fgeneshMC_pg.4_#_986
Mucor circinelloides
fgeneshMC_pg.4_#_986
I
0.648
fgeneshMC_pg.7_#_205
Mucor circinelloides
fgeneshMC_pg.7_#_205
N
0.599
fgeneshMC_pg.7_#_41
Mucor circinelloides
fgeneshMC_pg.7_#_41
I
0.612
fgeneshMC_pg.1_#_1591
Mucor circinelloides
fgeneshMC_pg.1_#_1591
I
0.647
fgeneshMC_pg.2_#_8
Mucor circinelloides
fgeneshMC_pg.2_#_8
I
0.607
fgeneshMC_pg.1_#_69
Mucor circinelloides
fgeneshMC_pg.1_#_69
I
0.648
NCAS_0B05980
Naumovozyma castellii
NCAS_0B05980
I
0.615
NDAI_0B03290
Naumovozyma dairenensis
NDAI_0B03290
I
0.617
NEPG_01845
Nematocida parisii ertm1
NEPG_01845
I
0.775
NERG_00880
Nematocida sp
NERG_00880
I
0.775
NEMVEDRAFT_v1g105595
Nematostella vectensis
NEMVEDRAFT_v1g105595
D
0.639
NAPIS_ORF00184
Nosema apis
NAPIS_ORF00184
I
0.795
NAPIS_ORF00325
Nosema apis
NAPIS_ORF00325
I
0.750
NBO_11g0012
Nosema bombycis
NBO_11g0012
I
0.790
NBO_6g0031
Nosema bombycis
NBO_6g0031
I
0.744
NBO_85g0005
Nosema bombycis
NBO_85g0005
I
0.790
NCER_100211
Nosema ceranae
NCER_100211
I
0.797
NCER_100315
Nosema ceranae
NCER_100315
I
0.750
M896_030550
Ordospora colligata
M896_030550
I
0.799
PAXRUDRAFT_10369
Paxillus rubicundulus
PAXRUDRAFT_10369
I
0.824
PHACADRAFT_257545
Phanerochaete carnosa
PHACADRAFT_257545
I
0.787
fgenesh1_pg.C_scaffold_15000074
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_15000074
I
0.787
PHLGIDRAFT_55548
Phlebiopsis gigantea
PHLGIDRAFT_55548
I
0.755
e_gw1.10.235.1
Phycomyces blakesleeanus
e_gw1.10.235.1
I
0.607
fgeneshPB_pg.11__229
Phycomyces blakesleeanus
fgeneshPB_pg.11__229
N
0.602
fgeneshPB_pg.18__155
Phycomyces blakesleeanus
fgeneshPB_pg.18__155
I
0.646
fgeneshPB_pg.6__195
Phycomyces blakesleeanus
fgeneshPB_pg.6__195
I
0.643
PILCRDRAFT_110903
Piloderma croceum
PILCRDRAFT_110903
I
0.614
PIIN_02203
Piriformospora indica
PIIN_02203
I
0.865
PISMIDRAFT_65337
Pisolithus microcarpus
PISMIDRAFT_65337
I
0.624
M404DRAFT_74218
Pisolithus tinctorius
M404DRAFT_74218
I
0.624
PLEOSDRAFT_173849
Pleurotus ostreatus
PLEOSDRAFT_173849
I
0.782
EFA86584.1
Polysphondylium pallidum
EFA86584.1
I
0.732
POSPLDRAFT_98870
Postia placenta
POSPLDRAFT_98870
I
0.787
PFL1_03213
Pseudozyma flocculosa
PFL1_03213
I
0.599
PFL1_02807
Pseudozyma flocculosa
PFL1_02807
I
0.602
PHSY_003535
Pseudozyma hubeiensis
PHSY_003535
I
0.602
PGTG_00338
Puccinia graminis
PGTG_00338
I
0.684
PTTG_03012
Puccinia triticina
PTTG_03012
I
0.620
PTTG_07330
Puccinia triticina
PTTG_07330
I
0.684
V565_070630
Rhizoctonia solani
V565_070630
I
0.673
GLOINDRAFT_43985
Rhizophagus irregularis
GLOINDRAFT_43985
I
0.627
GLOINDRAFT_4254
Rhizophagus irregularis
GLOINDRAFT_4254
I
0.608
GLOINDRAFT_21145
Rhizophagus irregularis
GLOINDRAFT_21145
I
0.692
RO3G_03200
Rhizopus oryzae
RO3G_03200
I
0.722
RO3G_02291
Rhizopus oryzae
RO3G_02291
I
0.688
RO3G_11930
Rhizopus oryzae
RO3G_11930
I
0.619
RO3G_13360
Rhizopus oryzae
RO3G_13360
I
0.619
RHTO_02593
Rhodosporidium toruloides
RHTO_02593
I
0.679
RHTO_06229
Rhodosporidium toruloides
RHTO_06229
I
0.651
RTG_01934
Rhodotorula glutinis
RTG_01934
I
0.651
Scas_Contig613.11
Saccharomyces castellii
Scas_Contig613.11
I
0.615
SCHCODRAFT_257987
Schizophyllum commune
SCHCODRAFT_257987
I
0.648
SCLCIDRAFT_97512
Scleroderma citrinum
SCLCIDRAFT_97512
I
0.632
SERLA73DRAFT_72643
Serpula lacrymans
SERLA73DRAFT_72643
I
0.808
SPPG_05107
Spizellomyces punctatus
SPPG_05107
I
0.691
sr15806
Sporisorium reilianum
sr15806
I
0.602
estExt_fgenesh1_pg.C_10219
Sporobolomyces roseus
estExt_fgenesh1_pg.C_10219
I
0.631
CY34DRAFT_109842
Suillus luteus
CY34DRAFT_109842
I
0.665
CY34DRAFT_106181
Suillus luteus
CY34DRAFT_106181
I
0.812
THOM_0497
Trachipleistophora hominis
THOM_0497
I
0.806
M407DRAFT_4599
Tulasnella calospora
M407DRAFT_4599
I
0.793
M407DRAFT_11655
Tulasnella calospora
M407DRAFT_11655
I
0.761
UHOR_07039
Ustilago hordei
UHOR_07039
I
0.602
UM04928
Ustilago maydis
UM04928
D
0.602
VCUG_00708
Vavraia culicis
VCUG_00708
I
0.801
J056_004115
Wallemia ichthyophaga
J056_004115
I
0.735
WALSEDRAFT_59197
Wallemia sebi
WALSEDRAFT_59197
I
0.731
YALI0_F16852g
Yarrowia lipolytica
YALI0_F16852g
I
0.644