MCINX005540 (Melitaea cinxia)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MCINX005540 T220479_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.809 0.630
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.809 0.630
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.809 0.630
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.809 0.630
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.809 0.630
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.809 0.630
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.809 0.630
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.809 0.630
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.809 0.630
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.720 0.391
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.720 0.391
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.720 0.391
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MCINX005540-PA Homeodomain 91 136

Links

Other Homeodomain family TFs
Other Melitaea cinxia TFs

1244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000005140 Anas platyrhynchos ENSAPLG00000005140 I
Afo_R007505 Aptenodytes forsteri Afo_R007505 I
ENSP00000395926-D1 Bos grunniens ENSP00000395926-D1 I
Brh_R001259 Buceros rhinoceros Brh_R001259 I
Aan_R014018 Calypte anna Aan_R014018 I
POU6F2 Canis familiaris ENSCAFG00000003571 I
ENSCPOG00000012221 Cavia porcellus ENSCPOG00000012221 I
ENSCSAG00000015201 Chlorocebus sabaeus ENSCSAG00000015201 I
POU6F2 Choloepus hoffmanni ENSCHOG00000003691 I
POU6F2 Echinops telfairi ENSETEG00000016373 I
POU6F2 Equus caballus ENSECAG00000013209 I
POU6F2 Erinaceus europaeus ENSEEUG00000006653 I
ENSFCAG00000008102 Felis catus ENSFCAG00000008102 I
ENSFALG00000005224 Ficedula albicollis ENSFALG00000005224 I
Gfo_R007861 Geospiza fortis Gfo_R007861 I
POU6F2 Gorilla gorilla ENSGGOG00000006718 I
POU6F2 Homo sapiens ENSG00000106536 D
ENSSTOG00000023336 Ictidomys tridecemlineatus ENSSTOG00000023336 I
ENSLACG00000002338 Latimeria chalumnae ENSLACG00000002338 I
ENSLOCG00000011317 Lepisosteus oculatus ENSLOCG00000011317 I
ENSP00000395926 Macaca fascicularis ENSP00000395926 I
POU6F2 Macaca mulatta ENSMMUG00000017106 I
ENSMGAG00000012235 Meleagris gallopavo ENSMGAG00000012235 I
POU6F2 Microcebus murinus ENSMICG00000007361 I
ENSMPUG00000018132 Mustela putorius furo ENSMPUG00000018132 I
Pou6f2 Mus musculus ENSMUSG00000009734 I
Myotis_brandtii_POU6F2_10011220 Myotis brandtii Myotis_brandtii_POU6F2_10011220 I
ENSMLUG00000002698 Myotis lucifugus ENSMLUG00000002698 I
ENSNLEG00000003036 Nomascus leucogenys ENSNLEG00000003036 I
Ogr18087 Ophisaurus gracilis Ogr18087 I
ENSOGAG00000033061 Otolemur garnettii ENSOGAG00000033061 I
ENSOARG00000017698 Ovis aries ENSOARG00000017698 I
POU6F2 Pan troglodytes ENSPTRG00000019105 I
ENSPANG00000007998 Papio anubis ENSPANG00000007998 I
ENSPSIG00000017568 Pelodiscus sinensis ENSPSIG00000017568 I
Pvit_04153 Pogona vitticeps Pvit_04153 I
POU6F2 Pteropus vampyrus ENSPVAG00000012960 I
Pou6f2 Rattus norvegicus ENSRNOG00000013237 I
POU6F2 Taeniopygia guttata ENSTGUG00000001859 I
Tal_R002298 Tyto alba Tal_R002298 I
pou6f2 Xenopus tropicalis XB-GENE-853682 I