MLOC_61603 (Hordeum vulgare)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MLOC_61603 T220705_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.849 0.929
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.849 0.929
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.849 0.929
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.844 0.857
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.844 0.857
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_61603.1 Homeodomain 31 90
MLOC_61603.2 Homeodomain 31 90
MLOC_61603.3 Homeodomain 31 90
MLOC_61603.4 Homeodomain 31 90

Links

Other Homeodomain family TFs
Other Hordeum vulgare TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008014 Ailuropoda melanoleuca ENSAMEG00000008014 N
POU2F3 Canis familiaris ENSCAFG00000011978 N
POU2F3 Felis catus ENSFCAG00000003355 N
ENSTSYG00000001227 Tarsius syrichta ENSTSYG00000001227 I