MLOC_65462 (Hordeum vulgare)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MLOC_65462 T220712_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.790 0.737
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.790 0.737
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.790 0.737
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.790 0.737
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.760 0.719
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.758 0.684
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.758 0.684
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.758 0.684
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.758 0.684
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.740 0.684
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.740 0.684
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.740 0.684
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.740 0.684
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.740 0.667
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.740 0.667
ATHB-21
M06907_2.00 		Arabidopsis thaliana
NNWHCAATWATTDN
NHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB21_col_a 		0.713 0.684
ATHB-21
M06908_2.00 		Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN
NNAHCAATWATTDNNNHHWW		 Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a 		0.713 0.684
HB-5
M06924_2.00 		Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH
DWWDNNNHMAATWATTGDTNN		 Dap-seq
OMalley et al.(2016)
ATHB40_col_a 		0.710 0.667
HB-5
M06925_2.00 		Arabidopsis thaliana
HHAATWATTGDWNN
NNWHCAATWATTDD		 Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a 		0.710 0.667
ATHB-53
M06934_2.00 		Arabidopsis thaliana
HMAATAATTRD
HYAATTATTKD		 Dap-seq
OMalley et al.(2016)
ATHB53_col_a 		0.706 0.632
ATHB-53
M06935_2.00 		Arabidopsis thaliana
NNWHCAATWATTDDN
NHHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a 		0.706 0.632
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.602 0.667
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.602 0.667
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.602 0.667
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.602 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_65462.1 Homeodomain 77 134
MLOC_65462.2 Homeodomain 12 69

Links

Other Homeodomain family TFs
Other Hordeum vulgare TFs

785 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002526 Ailuropoda melanoleuca ENSAMEG00000002526 I 0.000
Alligator_sinensis_CCG010084.1 Alligator sinensis Alligator_sinensis_CCG010084.1 I 0.000
ENSAPLG00000012306 Anas platyrhynchos ENSAPLG00000012306 I 0.000
Afo_R003544 Aptenodytes forsteri Afo_R003544 I 0.000
ENSP00000386200-D1 Bos grunniens ENSP00000386200-D1 I 0.000
FOXP2 Bos taurus ENSBTAG00000011246 I 0.000
Brh_R011655 Buceros rhinoceros Brh_R011655 I 0.000
FOXP2 Callithrix jacchus ENSCJAG00000017044 I 0.000
Aan_R002069 Calypte anna Aan_R002069 I 0.000
FOXP2 Canis familiaris ENSCAFG00000003387 I 0.000
FOXP2 Cavia porcellus ENSCPOG00000000938 I 0.000
Cmyd_10012969 Chelonia mydas Cmyd_10012969 I 0.000
ENSCSAG00000011057 Chlorocebus sabaeus ENSCSAG00000011057 I 0.000
FOXP2 Choloepus hoffmanni ENSCHOG00000011947 I 0.000
FOXP2 Dasypus novemcinctus ENSDNOG00000016038 I 0.000
Foxp2 Dipodomys ordii ENSDORG00000007040 I 0.000
FOXP2 Echinops telfairi ENSETEG00000018133 I 0.000
FOXP2 Equus caballus ENSECAG00000023867 I 0.000
FOXP2 Erinaceus europaeus ENSEEUG00000011289 I 0.000
ENSFCAG00000006921 Felis catus ENSFCAG00000006921 I 0.000
ENSFALG00000009530 Ficedula albicollis ENSFALG00000009530 I 0.000
FOXP2 Gallus gallus ENSGALG00000009424 I 0.000
Gfo_R005764 Geospiza fortis Gfo_R005764 I 0.000
FOXP2 Gorilla gorilla ENSGGOG00000027435 I 0.000
FOXP2 Homo sapiens ENSG00000128573 D 0.000
ENSSTOG00000008964 Ictidomys tridecemlineatus ENSSTOG00000008964 I 0.000
ENSLACG00000012807 Latimeria chalumnae ENSLACG00000012807 I 0.000
FOXP2 Loxodonta africana ENSLAFG00000012661 I 0.000
ENSP00000386200 Macaca fascicularis ENSP00000386200 I 0.000
FOXP2 Macaca mulatta ENSMMUG00000008005 I 0.000
ENSMEUG00000001273 Macropus eugenii ENSMEUG00000001273 I 0.000
FOXP2 Meleagris gallopavo ENSMGAG00000008987 I 0.000
FOXP2 Microcebus murinus ENSMICG00000003648 I 0.000
FOXP2 Monodelphis domestica ENSMODG00000015863 I 0.000
ENSMPUG00000007316 Mustela putorius furo ENSMPUG00000007316 I 0.000
Foxp2 Mus musculus ENSMUSG00000029563 D 0.000
Myotis_brandtii_FOXP2_10011872 Myotis brandtii Myotis_brandtii_FOXP2_10011872 I 0.000
FOXP2 Myotis lucifugus ENSMLUG00000015998 I 0.000
ENSNLEG00000011394 Nomascus leucogenys ENSNLEG00000011394 I 0.000
FOXP2 Ochotona princeps ENSOPRG00000005915 I 0.000
Ogr13848 Ophisaurus gracilis Ogr13848 I 0.000
FOXP2 Ornithorhynchus anatinus ENSOANG00000001697 I 0.000
FOXP2 Oryctolagus cuniculus ENSOCUG00000001801 I 0.000
FOXP2 Otolemur garnettii ENSOGAG00000002833 I 0.000
ENSOARG00000001772 Ovis aries ENSOARG00000001772 I 0.000
FOXP2 Pan troglodytes ENSPTRG00000019608 I 0.000
ENSPANG00000024715 Papio anubis ENSPANG00000024715 I 0.000
ENSPSIG00000013338 Pelodiscus sinensis ENSPSIG00000013338 I 0.000
Pvit_16439 Pogona vitticeps Pvit_16439 I 0.000
ENSPPYG00000017926 Pongo abelii ENSPPYG00000017926 I 0.000
FOXP2 Procavia capensis ENSPCAG00000005232 I 0.000
FOXP2 Pteropus vampyrus ENSPVAG00000005340 I 0.000
Foxp2 Rattus norvegicus ENSRNOG00000054508 I 0.000
ENSSHAG00000018566 Sarcophilus harrisii ENSSHAG00000018566 I 0.000
FOXP2 Sorex araneus ENSSARG00000008985 I 0.000
FOXP2 Sus scrofa ENSSSCG00000016639 I 0.000
FOXP2 Taeniopygia guttata ENSTGUG00000005315 I 0.000
ENSTSYG00000001293 Tarsius syrichta ENSTSYG00000001293 I 0.000
FOXP2 Tupaia belangeri ENSTBEG00000013640 N 0.000
FOXP2 Tursiops truncatus ENSTTRG00000005569 I 0.000
Tal_R007146 Tyto alba Tal_R007146 I 0.000
foxp2.L Xenopus laevis XB-GENE-864899 I 0.000