MTR_4g019450 (Medicago truncatula)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MTR_4g019450 T220806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.826 0.681
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.638 0.574
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.606 0.426
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.606 0.426
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.606 0.426
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.606 0.426
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH28955 Homeodomain 371 420

Links

Other Homeodomain family TFs
Other Medicago truncatula TFs

1006 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_190401 Agaricus bisporus AGABI2DRAFT_190401 N 0.000
M378DRAFT_157099 Amanita muscaria M378DRAFT_157099 N 0.000
CCM_01630 Cordyceps militaris CCM_01630 N 0.000
GALMADRAFT_239880 Galerina marginata GALMADRAFT_239880 N 0.000
GLOTRDRAFT_71884 Gloeophyllum trabeum GLOTRDRAFT_71884 N 0.000
M413DRAFT_105950 Hebeloma cylindrosporum M413DRAFT_105950 N 0.000
JAAARDRAFT_32137 Jaapia argillacea JAAARDRAFT_32137 N 0.000
K443DRAFT_672745 Laccaria amethystina K443DRAFT_672745 N 0.000
LACBIDRAFT_306097 Laccaria bicolor LACBIDRAFT_306097 N 0.000
Moror_8326 Moniliophthora roreri Moror_8326 N 0.000
PABG_03064 Paracoccidioides brasiliensis PABG_03064 I 0.000
PILCRDRAFT_823114 Piloderma croceum PILCRDRAFT_823114 N 0.000
GMDG_02536 Pseudogymnoascus destructans GMDG_02536 I 0.000
V499_02495 Pseudogymnoascus pannorum V499_02495 I 0.000
SCHCODRAFT_13988 Schizophyllum commune SCHCODRAFT_13988 N 0.000
SERLA73DRAFT_186737 Serpula lacrymans SERLA73DRAFT_186737 N 0.000
CY34DRAFT_804807 Suillus luteus CY34DRAFT_804807 N 0.000
BN946_scf185014.g71 Trametes cinnabarina BN946_scf185014.g71 I 0.000
YALI0_F05346g Yarrowia lipolytica YALI0_F05346g N 0.000