OB09G18680 (Oryza brachyantha)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OB09G18680 T221277_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.834 0.807
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.770 0.825
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.770 0.825
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.768 0.772
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.768 0.772
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.768 0.772
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.746 0.649
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.746 0.649
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.740 0.825
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.740 0.825
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.740 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB09G18680.1 Homeodomain 180 236

Links

Other Homeodomain family TFs
Other Oryza brachyantha TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004806 Ailuropoda melanoleuca ENSAMEG00000004806 N 0.000
ENSBTAP00000001247-D1 Bos grunniens ENSBTAP00000001247-D1 N 0.000
ENSBTAG00000000943 Bos taurus ENSBTAG00000000943 N 0.000
ENSCJAG00000004366 Callithrix jacchus ENSCJAG00000004366 N 0.000
ENSCAFG00000031764 Canis familiaris ENSCAFG00000031764 N 0.000
ENSCPOG00000012429 Cavia porcellus ENSCPOG00000012429 N 0.000
ENSCSAG00000008839 Chlorocebus sabaeus ENSCSAG00000008839 N 0.000
ENSDNOG00000047188 Dasypus novemcinctus ENSDNOG00000047188 N 0.000
ENSDORG00000003193 Dipodomys ordii ENSDORG00000003193 N 0.000
ENSETEG00000005043 Echinops telfairi ENSETEG00000005043 N 0.000
ENSECAG00000002943 Equus caballus ENSECAG00000002943 N 0.000
ENSFCAG00000029151 Felis catus ENSFCAG00000029151 N 0.000
ENSGGOG00000022789 Gorilla gorilla ENSGGOG00000022789 N 0.000
ZNF286A Homo sapiens ENSG00000187607 N 0.000
ENSSTOG00000024669 Ictidomys tridecemlineatus ENSSTOG00000024669 N 0.000
ENSLAFG00000016102 Loxodonta africana ENSLAFG00000016102 N 0.000
ENSMMUP00000003150 Macaca fascicularis ENSMMUP00000003150 N 0.000
ENSMMUG00000002354 Macaca mulatta ENSMMUG00000002354 N 0.000
ENSMPUG00000010104 Mustela putorius furo ENSMPUG00000010104 N 0.000
ENSMLUG00000015932 Myotis lucifugus ENSMLUG00000015932 N 0.000
ENSNLEG00000014652 Nomascus leucogenys ENSNLEG00000014652 N 0.000
ENSOPRG00000013892 Ochotona princeps ENSOPRG00000013892 N 0.000
ENSOCUG00000024037 Oryctolagus cuniculus ENSOCUG00000024037 N 0.000
ENSOGAG00000005719 Otolemur garnettii ENSOGAG00000005719 N 0.000
ZNF286A Pan troglodytes ENSPTRG00000008803 N 0.000
ENSPANG00000023728 Papio anubis ENSPANG00000023728 N 0.000
ENSPPYG00000029913 Pongo abelii ENSPPYG00000029913 N 0.000
ENSPVAG00000015636 Pteropus vampyrus ENSPVAG00000015636 N 0.000
Zfp286a Rattus norvegicus ENSRNOG00000003218 N 0.000
ENSSARG00000003418 Sorex araneus ENSSARG00000003418 N 0.000
ENSSSCG00000018029 Sus scrofa ENSSSCG00000018029 N 0.000
ENSTSYG00000002897 Tarsius syrichta ENSTSYG00000002897 N 0.000
ENSTTRG00000017194 Tursiops truncatus ENSTTRG00000017194 N 0.000
ENSVPAG00000012293 Vicugna pacos ENSVPAG00000012293 N 0.000