OBART10G13430 (Oryza barthii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OBART10G13430 T221371_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.837 0.911
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.837 0.911
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.837 0.911
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.832 0.875
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.832 0.875
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART10G13430.1 Homeodomain 28 87
OBART10G13430.2 Homeodomain 41 100

Links

Other Homeodomain family TFs
Other Oryza barthii TFs

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M437DRAFT_14214 Aureobasidium melanogenum M437DRAFT_14214 N 0.000
AUEXF2481DRAFT_349637 Aureobasidium subglaciale AUEXF2481DRAFT_349637 N 0.000
COCC4DRAFT_195032 Bipolaris maydis COCC4DRAFT_195032 I 0.000
COCMIDRAFT_2843 Bipolaris oryzae COCMIDRAFT_2843 I 0.000
COCSADRAFT_26363 Bipolaris sorokiniana COCSADRAFT_26363 I 0.000
COCVIDRAFT_23515 Bipolaris victoriae COCVIDRAFT_23515 I 0.000
COCCADRAFT_100608 Bipolaris zeicola COCCADRAFT_100608 I 0.000
Bcin14g05090 Botrytis cinerea Bcin14g05090 N 0.000
e_gw1.9.140.1 Cochliobolus heterostrophus C5 e_gw1.9.140.1 I 0.000
CCM_08978 Cordyceps militaris CCM_08978 I 0.000
FFUJ_03763 Fusarium fujikuroi FFUJ_03763 I 0.000
FGRRES_01562 Fusarium graminearum FGRRES_01562 I 0.000
FOXG_11146 Fusarium oxysporum FOXG_11146 I 0.000
NechaG65166 Fusarium solani NechaG65166 I 0.000
GGTG_11194 Gaeumannomyces graminis GGTG_11194 I 0.000
MAPG_00750 Magnaporthe poae MAPG_00750 I 0.000
MBR_06803 Metarhizium brunneum MBR_06803 I 0.000
MGU_04562 Metarhizium guizhouense MGU_04562 I 0.000
MAJ_06041 Metarhizium majus MAJ_06041 I 0.000
X797_000023 Metarhizium robertsii X797_000023 I 0.000
estExt_Genewise1Plus.C_sca_8_chr1_1_00440 Nectria haematococca estExt_Genewise1Plus.C_sca_8_chr1_1_00440 I 0.000
aod-2 Neurospora crassa NCU03352 D 0.000
OIDMADRAFT_194965 Oidiodendron maius OIDMADRAFT_194965 I 0.000
OCS_05478 Ophiocordyceps sinensis OCS_05478 I 0.000
PODANS_3_6340 Podospora anserina PODANS_3_6340 I 0.000
PTT_07331 Pyrenophora teres PTT_07331 I 0.000
SETTUDRAFT_166610 Setosphaeria turcica SETTUDRAFT_166610 I 0.000
THITE_2156602 Thielavia terrestris THITE_2156602 I 0.000
VHEMI05725 Torrubiella hemipterigena VHEMI05725 I 0.000
TRIREDRAFT_78799 Trichoderma reesei TRIREDRAFT_78799 I 0.000
PV09_07306 Verruconis gallopava PV09_07306 N 0.000