CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OPUNC08G13170 *(Oryza punctata)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	OPUNC08G13170	T221777_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HAT5 M06914_2.00	Arabidopsis thaliana	NHAATAATTDW	WHAATTATTDN	Dap-seq OMalley et al.(2016) HAT5_col_a	0.825	0.825
HAT5 M06915_2.00	Arabidopsis thaliana	WNYAATAATTRWDN	NHWYAATTATTRNW	Dap-seq OMalley et al.(2016) HAT5_colamp_a	0.825	0.825
HAT5 M02683_2.00	Arabidopsis thaliana	SCAATAATTNNV	BNNAATTATTGS	SELEX Mathelier et al.(2014) MA0008.2	0.825	0.825
HAT5 M10624_2.00	Arabidopsis thaliana	YSCAATAATTNNVN	NBNNAATTATTGSR	Transfac Matys et al.(2006) P$ATHB1_01	0.825	0.825
estExt_gwp_gw1.C_70211 M02220_2.00	Physcomitrella patens	HMATNANDNN	NNHNTNATKD	PBM Weirauch et al.(2014) pTH8489	0.793	0.772
ATHB-16 M02050_2.00	Arabidopsis thaliana	YAATMATT	AATKATTR	PBM Weirauch et al.(2014) pTH7270	0.793	0.754
ATHB-6 M02040_2.00	Arabidopsis thaliana	HATNATTDN	NHAATNATD	PBM Weirauch et al.(2014) pTH7670	0.793	0.737
ATHB-6 M06909_2.00	Arabidopsis thaliana	NNNHATKATTR	YAATMATDNNN	Dap-seq OMalley et al.(2016) ATHB6_col_a	0.793	0.737
ATHB-6 M06910_2.00	Arabidopsis thaliana	NCAATAATTRN	NYAATTATTGN	Dap-seq OMalley et al.(2016) ATHB6_colamp_a	0.793	0.737
ATHB-13 M06900_2.00	Arabidopsis thaliana	HYAATAATTDD	HHAATTATTRD	Dap-seq OMalley et al.(2016) ATHB13_col_a	0.775	0.719
ATHB-13 M06901_2.00	Arabidopsis thaliana	NYAATAATTRW	WYAATTATTRN	Dap-seq OMalley et al.(2016) ATHB13_colamp_a	0.775	0.719
ATHB-5 M06932_2.00	Arabidopsis thaliana	NYAATMATTND	HNAATKATTRN	Dap-seq OMalley et al.(2016) ATHB5_col_a	0.775	0.719
ATHB-5 M06933_2.00	Arabidopsis thaliana	NYAATMATTN	NAATKATTRN	Dap-seq OMalley et al.(2016) ATHB5_colamp_a	0.775	0.719
ATHB-5 M02684_2.00	Arabidopsis thaliana	CAATVATTGVVSV	BSBBCAATBATTG	SELEX Mathelier et al.(2014) MA0110.2	0.775	0.719
ATHB-5 M10630_2.00	Arabidopsis thaliana	CAATVATTG	CAATBATTG	Transfac Matys et al.(2006) P$ATHB5_01	0.775	0.719
ATHB-21 M06907_2.00	Arabidopsis thaliana	NNWHCAATWATTDN	NHAATWATTGDWNN	Dap-seq OMalley et al.(2016) ATHB21_col_a	0.703	0.667
ATHB-21 M06908_2.00	Arabidopsis thaliana	WWDDNNNHAATWATTGDTNN	NNAHCAATWATTDNNNHHWW	Dap-seq OMalley et al.(2016) ATHB21_colamp_a	0.703	0.667
HB-5 M06924_2.00	Arabidopsis thaliana	NNAHCAATWATTKDNNNHWWH	DWWDNNNHMAATWATTGDTNN	Dap-seq OMalley et al.(2016) ATHB40_col_a	0.702	0.684
HB-5 M06925_2.00	Arabidopsis thaliana	HHAATWATTGDWNN	NNWHCAATWATTDD	Dap-seq OMalley et al.(2016) ATHB40_colamp_a	0.702	0.684
ATHB-53 M06934_2.00	Arabidopsis thaliana	HMAATAATTRD	HYAATTATTKD	Dap-seq OMalley et al.(2016) ATHB53_col_a	0.697	0.649
ATHB-53 M06935_2.00	Arabidopsis thaliana	NNWHCAATWATTDDN	NHHAATWATTGDWNN	Dap-seq OMalley et al.(2016) ATHB53_colamp_a	0.697	0.649
ATHB-20 M06912_2.00	Arabidopsis thaliana	HYAATAATTRD	HYAATTATTRD	Dap-seq OMalley et al.(2016) ATHB20_col_a	0.657	0.719
ATHB-20 M06913_2.00	Arabidopsis thaliana	HYAATMATTRD	HYAATKATTRD	Dap-seq OMalley et al.(2016) ATHB20_colamp_a	0.657	0.719
PK20392.1 M01250_2.00	Cannabis sativa	NHAATMATDN	NHATKATTDN	PBM Lambert et al.(2019) pTH11331	0.637	0.719
PK20392.1 M01251_2.00	Cannabis sativa	NHAATMATDN	NHATKATTDN	PBM Lambert et al.(2019) pTH11332	0.637	0.719
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OPUNC08G13170.1	Homeodomain	81	137	PEKKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKT

Links
Other Homeodomain family TFs
Other *Oryza punctata* TFs

784 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AGOS_ABR089C	Ashbya gossypii	AGOS_ABR089C	I	0.000
CaO19.12215	Candida albicans	CaO19.12215	I	0.000
CaO19.4752	Candida albicans	CaO19.4752	D	0.000
CD36_08440	Candida dubliniensis	CD36_08440	I	0.000
CAGL0F05995g	Candida glabrata	CAGL0F05995g	D	0.000
CAGL0M13189g	Candida glabrata	CAGL0M13189g	D	0.000
Ecym_2301	Eremothecium cymbalariae	Ecym_2301	I	0.000
KAFR_0A02320	Kazachstania africana	KAFR_0A02320	I	0.000
KAFR_0F02070	Kazachstania africana	KAFR_0F02070	I	0.000
KNAG_0H00550	Kazachstania naganishii	KNAG_0H00550	I	0.000
KNAG_0M02310	Kazachstania naganishii	KNAG_0M02310	I	0.000
KLLA0_F26961g	Kluyveromyces lactis	KLLA0_F26961g	D	0.000
KLTH0D08734g	Kluyveromyces thermotolerans	KLTH0D08734g	I	0.000
Kwal_8351	Kluyveromyces waltii	Kwal_8351	I	0.000
SAKL0B11330g	Lachancea kluyveri	SAKL0B11330g	I	0.000
LALA0_S09e05358g	Lachancea lanzarotensis	LALA0_S09e05358g	I	0.000
KLTH0D08734g	Lachancea thermotolerans	KLTH0D08734g	I	0.000
NCAS_0A12910	Naumovozyma castellii	NCAS_0A12910	I	0.000
NCAS_0H03080	Naumovozyma castellii	NCAS_0H03080	I	0.000
NDAI_0B01340	Naumovozyma dairenensis	NDAI_0B01340	I	0.000
NDAI_0C00560	Naumovozyma dairenensis	NDAI_0C00560	I	0.000
SU7_1995	Saccharomyces arboricola	SU7_1995	I	0.000
SU7_2517	Saccharomyces arboricola	SU7_2517	I	0.000
17588_YMR037C	Saccharomyces bayanus	17588_YMR037C	I	0.000
14538_YKL062W	Saccharomyces bayanus	14538_YKL062W	I	0.000
Scas_Contig709.32	Saccharomyces castellii	Scas_Contig709.32	I	0.000
Scas_Contig649.28	Saccharomyces castellii	Scas_Contig649.28	I	0.000
Scas_Contig649.29	Saccharomyces castellii	Scas_Contig649.29	I	0.000
MSN4	Saccharomyces cerevisiae	YKL062W	D	0.000
MSN2	Saccharomyces cerevisiae	YMR037C	D	0.000
SKUD_158203	Saccharomyces kudriavzevii	SKUD_158203	I	0.000
16548_YMR037C	Saccharomyces mikatae	16548_YMR037C	I	0.000
13440_YKL062W	Saccharomyces mikatae	13440_YKL062W	I	0.000
17169_YMR037C	Saccharomyces paradoxus	17169_YMR037C	I	0.000
13715_YKL062W	Saccharomyces paradoxus	13715_YKL062W	I	0.000
AACERI_AaceriABR089C	Saccharomycetaceae sp ashbya aceri	AACERI_AaceriABR089C	I	0.000
TBLA_0H02830	Tetrapisispora blattae	TBLA_0H02830	I	0.000
TBLA_0G01920	Tetrapisispora blattae	TBLA_0G01920	I	0.000
TPHA_0N01460	Tetrapisispora phaffii	TPHA_0N01460	I	0.000
TPHA_0C02580	Tetrapisispora phaffii	TPHA_0C02580	I	0.000
TDEL_0B06910	Torulaspora delbrueckii	TDEL_0B06910	I	0.000
Kpol_185p3	Vanderwaltozyma polyspora	Kpol_185p3	I	0.000
Kpol_1013p21	Vanderwaltozyma polyspora	Kpol_1013p21	I	0.000
BN7_2125	Wickerhamomyces ciferrii	BN7_2125	I	0.000
ZBAI_08525	Zygosaccharomyces bailii	ZBAI_08525	I	0.000
ZYRO0F01012g	Zygosaccharomyces rouxii	ZYRO0F01012g	I	0.000

OPUNC08G13170 (Oryza punctata) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

784 Related TFs

OPUNC08G13170 **(Oryza punctata)
Homeodomain**