ORGLA03G0327300 (Oryza glaberrima)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORGLA03G0327300 T221836_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.681 0.412
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.681 0.412
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.681 0.392
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.668 0.392
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.635 0.373
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0327300.1 Homeodomain 278 329

Links

Other Homeodomain family TFs
Other Oryza glaberrima TFs

1194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI002959 Acyrthosiphon pisum ACYPI002959 N 0.000
GB50048 Apis mellifera GB50048 N 0.000
CLEC012958 Cimex lectularius CLEC012958 N 0.000
YQE_12847 Dendroctonus ponderosae YQE_12847 N 0.000
HHAL003515-PA Halyomorpha halys HHAL003515-PA N 0.000
ISCW019047 Ixodes scapularis ISCW019047 N 0.000
LDEC001996 Leptinotarsa decemlineata LDEC001996 N 0.000
PHUM461050 Pediculus humanus PHUM461050 N 0.000
PPAI001250 Phlebotomus papatasi PPAI001250 N 0.000
RPRC010858 Rhodnius prolixus RPRC010858 N 0.000
SMAR000814 Strigamia maritima SMAR000814 N 0.000
TC012464 Tribolium castaneum TC012464 N 0.000
L798_02049 Zootermopsis nevadensis L798_02049 N 0.000