PGSC0003DMG401029143 (Solanum tuberosum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PGSC0003DMG401029143 T222231_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.833 0.912
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.833 0.912
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.833 0.912
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.829 0.930
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.829 0.930
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400074932 Homeodomain 15 75

Links

Other Homeodomain family TFs
Other Solanum tuberosum TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB04375.1 Alternaria brassicicola AB04375.1 I
MCYG_00903 Arthroderma otae MCYG_00903 I
ATEG_03075 Aspergillus terreus CADATEAG00010055 I
BAUCODRAFT_144230 Baudoinia compniacensis BAUCODRAFT_144230 I
COCC4DRAFT_126547 Bipolaris maydis COCC4DRAFT_126547 I
COCMIDRAFT_84665 Bipolaris oryzae COCMIDRAFT_84665 I
COCSADRAFT_102727 Bipolaris sorokiniana COCSADRAFT_102727 I
COCVIDRAFT_34345 Bipolaris victoriae COCVIDRAFT_34345 I
COCCADRAFT_37717 Bipolaris zeicola COCCADRAFT_37717 I
Bcin10g03410 Botrytis cinerea Bcin10g03410 I
CTHT_0024110 Chaetomium thermophilum CTHT_0024110 I
CIMG_03917 Coccidioides immitis CIMG_03917 I
CPC735_004330 Coccidioides posadasii CPC735_004330 I
W97_02650 Coniosporium apollinis W97_02650 I
DOTSEDRAFT_68166 Dothistroma septosporum DOTSEDRAFT_68166 I
EPUS_04985 Endocarpon pusillum EPUS_04985 I
HCBG_06971 Histoplasma capsulatum HCBG_06971 I
LEMA_P018010.1 Leptosphaeria maculans LEMA_P018010.1 I
MPH_05713 Macrophomina phaseolina MPH_05713 I
MCYG_00903 Microsporum canis MCYG_00903 I
MYCTH_2304200 Myceliophthora thermophila MYCTH_2304200 I
UCRNP2_6191 Neofusicoccum parvum UCRNP2_6191 I
NFIA_019220 Neosartorya fischeri CADNFIAG00000884 I
F503_07914 Ophiostoma piceae uamh F503_07914 I
PABG_02907 Paracoccidioides brasiliensis PABG_02907 I
PAAG_08645 Paracoccidioides sp lutzii PAAG_08645 I
PMAA_024740 Penicillium marneffei PMAA_024740 I
PFICI_03782 Pestalotiopsis fici PFICI_03782 I
SNOG_11811 Phaeosphaeria nodorum SNOG_11811 I
MYCFIDRAFT_97410 Pseudocercospora fijiensis MYCFIDRAFT_97410 N
PTT_13020 Pyrenophora teres PTT_13020 I
PTRG_00243 Pyrenophora triticirepentis PTRG_00243 I
SBOR_2000 Sclerotinia borealis SBOR_2000 I
SS1G_06977 Sclerotinia sclerotiorum SS1G_06977 I
SETTUDRAFT_102560 Setosphaeria turcica SETTUDRAFT_102560 I
SPBR_00313 Sporothrix brasiliensis SPBR_00313 N
HMPREF1624_06509 Sporothrix schenckii HMPREF1624_06509 N
PMAA_024740 Talaromyces marneffei PMAA_024740 I
TSTA_033430 Talaromyces stipitatus TSTA_033430 I
TEQG_01462 Trichophyton equinum TEQG_01462 N
H101_07436 Trichophyton interdigitale H101_07436 N
H102_07847 Trichophyton rubrum H102_07847 N
H105_07872 Trichophyton soudanense H105_07872 N
PV09_02665 Verruconis gallopava PV09_02665 I
VDAG_06431 Verticillium dahliae VDAG_06431 I