CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHUM171660
(
Pediculus humanus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PHUM171660
T222294_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.754
0.553
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.754
0.553
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.754
0.553
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.754
0.553
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.754
0.553
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.754
0.553
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.754
0.553
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.754
0.553
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.754
0.553
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.670
0.340
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.670
0.340
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.670
0.340
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM171660-PA
Homeodomain
88
134
RRYRTTFSNYQLDELERAFRETHYPDVFFREELALRIDLTEARVQNL
Links
Other
Homeodomain
family TFs
Other
Pediculus humanus
TFs
1183 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_214436
Agaricus bisporus
AGABI2DRAFT_214436
N
M378DRAFT_155674
Amanita muscaria
M378DRAFT_155674
N
BOTBODRAFT_172908
Botryobasidium botryosum
BOTBODRAFT_172908
N
CERSUDRAFT_110761
Ceriporiopsis subvermispora
CERSUDRAFT_110761
N
GALMADRAFT_233700
Galerina marginata
GALMADRAFT_233700
N
GLOTRDRAFT_68601
Gloeophyllum trabeum
GLOTRDRAFT_68601
N
estExt_Genewise1Plus.C_10795
Heterobasidion annosum
estExt_Genewise1Plus.C_10795
N
HETIRDRAFT_468737
Heterobasidion irregulare
HETIRDRAFT_468737
N
JAAARDRAFT_203058
Jaapia argillacea
JAAARDRAFT_203058
N
K443DRAFT_673799
Laccaria amethystina
K443DRAFT_673799
N
LACBIDRAFT_300743
Laccaria bicolor
LACBIDRAFT_300743
N
Moror_1245
Moniliophthora roreri
Moror_1245
N
PAXRUDRAFT_157512
Paxillus rubicundulus
PAXRUDRAFT_157512
N
PHACADRAFT_247554
Phanerochaete carnosa
PHACADRAFT_247554
N
PHLGIDRAFT_83469
Phlebiopsis gigantea
PHLGIDRAFT_83469
N
PILCRDRAFT_817327
Piloderma croceum
PILCRDRAFT_817327
N
PIIN_04099
Piriformospora indica
PIIN_04099
N
PISMIDRAFT_91300
Pisolithus microcarpus
PISMIDRAFT_91300
N
M404DRAFT_134644
Pisolithus tinctorius
M404DRAFT_134644
N
PLEOSDRAFT_49413
Pleurotus ostreatus
PLEOSDRAFT_49413
N
PAN0_008d3627
Pseudozyma antarctica
PAN0_008d3627
N
PaG_06601
Pseudozyma aphidis
PaG_06601
N
PHSY_000700
Pseudozyma hubeiensis
PHSY_000700
N
V565_027830
Rhizoctonia solani
V565_027830
N
SCHCODRAFT_49649
Schizophyllum commune
SCHCODRAFT_49649
N
SCLCIDRAFT_108680
Scleroderma citrinum
SCLCIDRAFT_108680
N
M408DRAFT_325789
Serendipita vermifera
M408DRAFT_325789
N
SERLA73DRAFT_49851
Serpula lacrymans
SERLA73DRAFT_49851
N
sr13281
Sporisorium reilianum
sr13281
N
CY34DRAFT_25000
Suillus luteus
CY34DRAFT_25000
N
K437DRAFT_132732
Tilletiaria anomala
K437DRAFT_132732
N
estExt_fgeneshTM_pg.C_50362
Tremella mesenterica
estExt_fgeneshTM_pg.C_50362
N
A1Q1_02722
Trichosporon asahii
A1Q1_02722
N
A1Q1_05146
Trichosporon asahii
A1Q1_05146
N
M407DRAFT_219867
Tulasnella calospora
M407DRAFT_219867
N
UM02061
Ustilago maydis
UM02061
N