CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra85385
(
Phytophthora ramorum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Phyra85385
T222365_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra85385
Homeodomain
530
596
SRLYSSKQIQKLEEWYQRSSRPESSEIHSMYRIINCPDYADPELQPEGISVKQIRIWFDNRRAKERL
Phyra85385
Homeodomain
899
969
RRPRVKFSLAQLVKLEKYFHKEDTPSKKKLDKIAARLNGIASLDPSSDVAQRSIDYKQIRCWFYKRRSANQ
Phyra85385
Homeodomain
1078
1145
GRIFNVKQLATIIEEYEKNPRPTVARLEELQKVLNQGDHTDEHSVNALGVTKQRIKTWFSNRRAKERI
Links
Other
Homeodomain
family TFs
Other
Phytophthora ramorum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG008730.1
Alligator sinensis
Alligator_sinensis_CCG008730.1
N
Alligator_sinensis_CCG008729.1
Alligator sinensis
Alligator_sinensis_CCG008729.1
N
ENSAPLG00000001763
Anas platyrhynchos
ENSAPLG00000001763
N
AALB005025
Anopheles albimanus
AALB005025
N
AARA009353
Anopheles arabiensis
AARA009353
N
AATE012616
Anopheles atroparvus
AATE012616
N
ACOM031365
Anopheles coluzzii
ACOM031365
N
ACUA013442
Anopheles culicifacies
ACUA013442
N
ADAC008662
Anopheles darlingi
ADAC008662
N
ADIR007854
Anopheles dirus
ADIR007854
N
AEPI009272
Anopheles epiroticus
AEPI009272
N
AFAF005225
Anopheles farauti
AFAF005225
N
AFUN003918
Anopheles funestus
AFUN003918
N
AMAM022739
Anopheles maculatus
AMAM022739
N
AMEC011358
Anopheles melas
AMEC011358
N
AMEM016792
Anopheles merus
AMEM016792
N
AMIN011106
Anopheles minimus
AMIN011106
N
AQUA001970
Anopheles quadriannulatus
AQUA001970
N
ASIS018279
Anopheles sinensis
ASIS018279
N
ASTEI02568
Anopheles stephensi
ASTEI02568
N
ALUE_0001374401
Ascaris lumbricoides
ALUE_0001374401
N
ACEP25043
Atta cephalotes
ACEP25043
N
Brh_R008651
Buceros rhinoceros
Brh_R008651
N
Brh_R010138
Buceros rhinoceros
Brh_R010138
N
Aan_R000240
Calypte anna
Aan_R000240
N
Cflo_00612--XP_001121679.1_APIME
Camponotus floridanus
Cflo_00612--XP_001121679.1_APIME
N
Cflo_01441--XP_624772.1_APIME
Camponotus floridanus
Cflo_01441--XP_624772.1_APIME
N
Cmyd_10014845
Chelonia mydas
Cmyd_10014845
N
KLF8
Choloepus hoffmanni
ENSCHOG00000001301
N
CpipJ_CPIJ012897
Culex pipiens
CpipJ_CPIJ012897
N
CPIJ012897
Culex quinquefasciatus
CPIJ012897
N
YQE_09845
Dendroctonus ponderosae
YQE_09845
N
KLF1
Erinaceus europaeus
ENSEEUG00000008498
N
KLF8
Erinaceus europaeus
ENSEEUG00000014292
N
ENSFALG00000011272
Ficedula albicollis
ENSFALG00000011272
N
KLF7
Homo sapiens
ENSG00000118263
D
ISCW018441
Ixodes scapularis
ISCW018441
N
LLOJ003369
Lutzomyia longipalpis
LLOJ003369
N
LLOJ002499
Lutzomyia longipalpis
LLOJ002499
N
ENSMEUG00000011825
Macropus eugenii
ENSMEUG00000011825
N
Myotis_brandtii_Klf3_10026481
Myotis brandtii
Myotis_brandtii_Klf3_10026481
N
Ocbimv22007604m.g
Octopus bimaculoides
Ocbimv22007604m.g
N
RPRC002307
Rhodnius prolixus
RPRC002307
N
SINV10616
Solenopsis invicta
SINV10616
N
SINV23346
Solenopsis invicta
SINV23346
N
ENSTSYG00000005368
Tarsius syrichta
ENSTSYG00000005368
N
TC003612
Tribolium castaneum
TC003612
N
D917_05406
Trichinella nativa
D917_05406
N
D917_09826
Trichinella nativa
D917_09826
N
TTRE_0000486001
Trichuris trichiura
TTRE_0000486001
N
KLF7
Tupaia belangeri
ENSTBEG00000007537
N
Tal_R009016
Tyto alba
Tal_R009016
N
Tal_R010271
Tyto alba
Tal_R010271
N