POPTR_0009s07600 (Populus trichocarpa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 POPTR_0009s07600 T222541_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.657 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s07600.1 Homeodomain 19 75

Links

Other Homeodomain family TFs
Other Populus trichocarpa TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M437DRAFT_67323 Aureobasidium melanogenum M437DRAFT_67323 N 0.000
MVLG_05769 Microbotryum violaceum MVLG_05769 N 0.000
MVLG_06491 Microbotryum violaceum MVLG_06491 N 0.000
E5Q_00300 Mixia osmundae E5Q_00300 N 0.000
RHTO_01872 Rhodosporidium toruloides RHTO_01872 N 0.000
e_gw1.10.50.1 Sporobolomyces roseus e_gw1.10.50.1 N 0.000