CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb04g030480
(
Sorghum bicolor
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Sb04g030480
T222984_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZHD7
M02155_2.00
Oryza sativa
NNWAANNNNN
NNNNNTTWNN
PBM
Weirauch et al.(2014)
pTH6076
0.843
0.946
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb04g030480.1
Homeodomain
329
388
KRFRTKFTAEQKDRMREFAHRVGWRIHKPDADAVDAFCAQVGVSRRVLKVWMHNNKHLAR
Links
Other
Homeodomain
family TFs
Other
Sorghum bicolor
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.00772_#_196
Aspergillus carbonarius
fgenesh1_pm.00772_#_196
N
0.000
Cob_01084
Colletotrichum orbiculare
Cob_01084
N
0.000
SBOR_4808
Sclerotinia borealis
SBOR_4808
N
0.000