Solyc06g072310.2 (Solanum lycopersicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Solyc06g072310.2 T223592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.748 0.860
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.748 0.860
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.732 0.877
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.727 0.649
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.721 0.772
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.721 0.772
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.718 0.719
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.718 0.719
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.706 0.702
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.706 0.702
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.706 0.737
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.706 0.737
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.706 0.737
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.663 0.667
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.663 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g072310.2.1 Homeodomain 30 87

Links

Other Homeodomain family TFs
Other Solanum lycopersicum TFs

592 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005420 Ailuropoda melanoleuca ENSAMEG00000005420 N
ZNF7 Canis familiaris ENSCAFG00000030492 I
ZNF7 Cavia porcellus ENSCPOG00000010429 I
ZNF7 Dasypus novemcinctus ENSDNOG00000043881 I
Zfp7 Dipodomys ordii ENSDORG00000011889 I
ZNF7 Felis catus ENSFCAG00000012559 N
ZNF7 Gorilla gorilla ENSGGOG00000008185 I
ZNF7 Homo sapiens ENSG00000147789 D
ENSSTOG00000021142 Ictidomys tridecemlineatus ENSSTOG00000021142 I
ZNF7 Loxodonta africana ENSLAFG00000010535 I
ENSMPUG00000006051 Mustela putorius furo ENSMPUG00000006051 I
Myotis_brandtii_ZNF7_10006486 Myotis brandtii Myotis_brandtii_ZNF7_10006486 I
ZNF7 Oryctolagus cuniculus ENSOCUG00000022081 I
ZNF7 Pan troglodytes ENSPTRG00000020717 I
ENSPPYG00000018994 Pongo abelii ENSPPYG00000018994 I
ZNF7 Pteropus vampyrus ENSPVAG00000004291 I
Znf7 Rattus norvegicus ENSRNOG00000050497 I
LOC108348145 Rattus norvegicus ENSRNOG00000050695 I
ZNF7 Sorex araneus ENSSARG00000013435 I
ZNF7 Sus scrofa ENSSSCG00000005890 N