TCM_046875 (Theobroma cacao)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 TCM_046875 T223951_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY13134 Homeodomain 11 76

Links

Other Homeodomain family TFs
Other Theobroma cacao TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.781
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.808
Bostr.19424s0824 Boechera stricta Bostr.19424s0824 N 0.599
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.721
Bo5g118650 Brassica oleracea Bo5g118650 N 0.612
Bo1g117640 Brassica oleracea Bo1g117640 N 0.750
Bra037587 Brassica rapa Bra037587 N 0.750
PK03811.1 Cannabis sativa PK03811.1 N 0.755
Cagra.1681s0007 Capsella grandiflora Cagra.1681s0007 N 0.599
Carubv10014092m.g Capsella rubella Carubv10014092m.g N 0.599
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.838
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.838
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.831
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.763
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.746
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.825
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.824
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.863
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.776
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.743
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.722
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.826
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.826
chr3.CM0282.620.nc Lotus japonicus chr3.CM0282.620.nc N 0.825
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.726
MDP0000315095 Malus domestica MDP0000315095 N 0.740
MDP0000268133 Malus domestica MDP0000268133 N 0.740
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.823
mgf014854m Mimulus guttatus mgf014854m N 0.711
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.721
OBART06G15310 Oryza barthii OBART06G15310 N 0.722
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.722
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.722
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.722
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.722
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.722
OS06G0485100 Oryza sativa OS06G0485100 N 0.722
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.651
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.651
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.749
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.830
30209.m001510 Ricinus communis 30209.m001510 N 0.698
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.749
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.749
Si030167m.g Setaria italica Si030167m.g N 0.651
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.752
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.651
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.743
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.743
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.840
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.650