CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UCRNP2_645
(
Neofusicoccum parvum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
UCRNP2_645
T224419_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kal-1
M02225_2.00
Neurospora crassa
NNNNRHNN
NNDYNNNN
PBM
Weirauch et al.(2014)
pTH8911
0.843
0.912
hbx10
M02074_2.00
Dictyostelium discoideum
NYAATWWN
NWWATTRN
PBM
Weirauch et al.(2014)
pTH5547
0.678
0.474
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOD52555
Homeodomain
41
97
NQKRQRATQEQLMTLEMEFNKNPTPTAIVRERIAQEINMTERSVQIWFQNRRAKIKN
Links
Other
Homeodomain
family TFs
Other
Neofusicoccum parvum
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Da01739
Panicum virgatum
Pavir.Da01739
N
0.000
Pavir.J38547
Panicum virgatum
Pavir.J38547
N
0.000
Sb10g002680
Sorghum bicolor
Sb10g002680
N
0.000
Traes_4BL_9A17EA3B7
Triticum aestivum
Traes_4BL_9A17EA3B7
I
0.000