WOX4 (Vitis vinifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VIT_18s0001g10160 T224579_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.761 0.732
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.761 0.732
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_18s0001g10160.t01 Homeodomain 76 136

Links

Other Homeodomain family TFs
Other Vitis vinifera TFs

450 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_301478.1 Arabidopsis lyrata scaffold_301478.1 N 0.000
AT3G12977 Arabidopsis thaliana AT3G12977 N 0.000
Bostr.3640s0073 Boechera stricta Bostr.3640s0073 N 0.000
BRADI5G15587 Brachypodium distachyon BRADI5G15587 N 0.000
evm.TU.supercontig_165.12 Carica papaya evm.TU.supercontig_165.12 N 0.000
Cla023574 Citrullus lanatus Cla023574 N 0.000
GLYMA08G18470 Glycine max GLYMA08G18470 N 0.000
MLOC_12466 Hordeum vulgare MLOC_12466 N 0.000
LPERR02G20100 Leersia perrieri LPERR02G20100 N 0.000
MTR_1g008740 Medicago truncatula MTR_1g008740 I 0.000
GSMUA_AchrUn_randomG17260_001 Musa acuminata GSMUA_AchrUn_randomG17260_001 N 0.000
GSMUA_Achr6G36550_001 Musa acuminata GSMUA_Achr6G36550_001 N 0.000
GSMUA_Achr11G22760_001 Musa acuminata GSMUA_Achr11G22760_001 N 0.000
OBART02G24560 Oryza barthii OBART02G24560 N 0.000
OBART03G00700 Oryza barthii OBART03G00700 I 0.000
OBART04G18700 Oryza barthii OBART04G18700 N 0.000
OB02G31950 Oryza brachyantha OB02G31950 N 0.000
OB03G10720 Oryza brachyantha OB03G10720 N 0.000
OB04G25790 Oryza brachyantha OB04G25790 N 0.000
ORGLA03G0005100 Oryza glaberrima ORGLA03G0005100 I 0.000
ORGLA04G0158100 Oryza glaberrima ORGLA04G0158100 N 0.000
OGLUM03G00640 Oryza glumaepatula OGLUM03G00640 I 0.000
OGLUM04G18750 Oryza glumaepatula OGLUM04G18750 N 0.000
OGLUM02G24950 Oryza glumaepatula OGLUM02G24950 N 0.000
BGIOSGA016756 Oryza indica BGIOSGA016756 N 0.000
BGIOSGA011685 Oryza indica BGIOSGA011685 I 0.000
OLONG_000596 Oryza longistaminata OLONG_000596 N 0.000
OLONG_011232 Oryza longistaminata OLONG_011232 N 0.000
OLONG_025732 Oryza longistaminata OLONG_025732 I 0.000
OMERI02G24100 Oryza meridionalis OMERI02G24100 N 0.000
ONIVA04G01950 Oryza nivara ONIVA04G01950 N 0.000
ONIVA02G26880 Oryza nivara ONIVA02G26880 N 0.000
OPUNC03G00610 Oryza punctata OPUNC03G00610 N 0.000
OPUNC04G16450 Oryza punctata OPUNC04G16450 N 0.000
ORUFI02G25930 Oryza rufipogon ORUFI02G25930 N 0.000
ORUFI04G20200 Oryza rufipogon ORUFI04G20200 N 0.000
OS04G0515900 Oryza sativa OS04G0515900 N 0.000
Pavir.Gb00655 Panicum virgatum Pavir.Gb00655 N 0.000
Pavir.Ga01251 Panicum virgatum Pavir.Ga01251 N 0.000
Pavir.Ab02337 Panicum virgatum Pavir.Ab02337 N 0.000
Pavir.Aa01668 Panicum virgatum Pavir.Aa01668 N 0.000
29650.m000275 Ricinus communis 29650.m000275 N 0.000
SapurV1A.0085s0410 Salix purpurea SapurV1A.0085s0410 N 0.000
Si018001m.g Setaria italica Si018001m.g N 0.000
Si010799m.g Setaria italica Si010799m.g N 0.000
PGSC0003DMG400022134 Solanum tuberosum PGSC0003DMG400022134 N 0.000
Sb10g027100 Sorghum bicolor Sb10g027100 N 0.000
Sb04g026440 Sorghum bicolor Sb04g026440 N 0.000
Traes_2BL_D718E27A9 Triticum aestivum Traes_2BL_D718E27A9 N 0.000
TRIUR3_33179 Triticum urartu TRIUR3_33179 N 0.000
GRMZM2G081930 Zea mays GRMZM2G081930 N 0.000
GRMZM2G062009 Zea mays GRMZM2G062009 N 0.000
GRMZM2G043813 Zea mays GRMZM2G043813 N 0.000