Brh_R010491 (Buceros rhinoceros)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Brh_R010491 T225377_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.821 0.609
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.821 0.609
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.821 0.609
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.821 0.609
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.821 0.609
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.821 0.609
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.821 0.609
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.821 0.609
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.821 0.609
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.718 0.370
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.718 0.370
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.718 0.370
PHOX2B
M00282_2.00 		Homo sapiens
TAATTRRY
RYYAATTA		 PBM
Barrera et al.(2016)
PHOX2B_REF 		0.377 1.000
Phox2a
M00400_2.00 		Mus musculus
NNHAAYNN
NNRTTDNN		 PBM
Berger et al.(2008)
Phox2a_3947 		0.377 1.000
Phox2b
M00401_2.00 		Mus musculus
NNHAAYNN
NNRTTDNN		 PBM
Berger et al.(2008)
Phox2b_3948 		0.377 1.000
PHOX2A
M03194_2.00 		Homo sapiens
TAATTRVRTTA
TAAYBYAATTA		 SELEX
Jolma et al.(2013)
PHOX2A_1 		0.377 1.000
PHOX2B
M03113_2.00 		Homo sapiens
TAATTRVRTTA
TAAYBYAATTA		 SELEX
Jolma et al.(2013)
PHOX2B_1 		0.377 1.000
PHOX2B
M03114_2.00 		Homo sapiens
TAATTRVRTTA
TAAYBYAATTA		 SELEX
Jolma et al.(2013)
PHOX2B_2 		0.377 1.000
PHOX2A
M05244_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PHOX2A_eDBD_HT-SELEX 		0.377 1.000
PHOX2B
M05008_2.00 		Homo sapiens
BTAATYRV
BYRATTAV		 SELEX
Yin et al.(2017)
PHOX2B_eDBD_HT-SELEX 		0.377 1.000
PHOX2B
M05010_2.00 		Homo sapiens
TAATTWRATTA
TAATYWAATTA		 SELEX
Yin et al.(2017)
PHOX2B_FL_HT-SELEX 		0.377 1.000
Phox2a
M09564_2.00 		Mus musculus
NTAATBNRATTA
TAATYNVATTAN		 Misc
Heinz et al.(2010)
Neuron-Phox2a_GSE31456 		0.377 1.000
PHOX2A
M05245_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PHOX2A_eDBD_Methyl-HT-SELEX 		0.377 1.000
PHOX2B
M05009_2.00 		Homo sapiens
BTAATYRN
NYRATTAV		 SELEX
Yin et al.(2017)
PHOX2B_eDBD_Methyl-HT-SELEX 		0.377 1.000
PHOX2B
M05011_2.00 		Homo sapiens
TAATTHRATTA
TAATYDAATTA		 SELEX
Yin et al.(2017)
PHOX2B_FL_Methyl-HT-SELEX 		0.377 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R010491 Homeodomain 96 141

Links

Other Homeodomain family TFs
Other Buceros rhinoceros TFs

1325 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015251 Ailuropoda melanoleuca ENSAMEG00000015251 I 0.811
ANCCAN_14904 Ancylostoma caninum ANCCAN_14904 I 0.807
AALB009240 Anopheles albimanus AALB009240 I 0.760
AALB010343 Anopheles albimanus AALB010343 I 0.624
AARA001944 Anopheles arabiensis AARA001944 I 0.760
AATE017848 Anopheles atroparvus AATE017848 I 0.760
ACHR005199 Anopheles christyi ACHR005199 I 0.778
ACOM034215 Anopheles coluzzii ACOM034215 I 0.760
ACUA026361 Anopheles culicifacies ACUA026361 I 0.731
AEPI006202 Anopheles epiroticus AEPI006202 I 0.760
AFUN001245 Anopheles funestus AFUN001245 I 0.760
AMAM015363 Anopheles maculatus AMAM015363 I 0.760
AMEC010052 Anopheles melas AMEC010052 I 0.790
AMEC000828 Anopheles melas AMEC000828 I 0.778
AMIN002392 Anopheles minimus AMIN002392 I 0.760
AQUA003376 Anopheles quadriannulatus AQUA003376 I 0.790
AQUA000369 Anopheles quadriannulatus AQUA000369 I 0.760
ASTEI05725 Anopheles stephensi ASTEI05725 I 0.760
Afo_R008451 Aptenodytes forsteri Afo_R008451 I 0.757
ASU_05569 Ascaris suum ASU_05569 I 0.789
ENSBTAP00000008893-D1 Bos grunniens ENSBTAP00000008893-D1 I 0.638
UNCX Bos taurus ENSBTAG00000030721 I 0.811
e_gw.5.736.1 Branchiostoma floridae e_gw.5.736.1 I 0.815
BTMF_0001647601 Brugia timori BTMF_0001647601 I 0.807
CJA15792 Caenorhabditis japonica CJA15792 I 0.789
ENSCJAG00000015773 Callithrix jacchus ENSCJAG00000015773 I 0.811
CLEC013753 Cimex lectularius CLEC013753 I 0.798
CGOC_0000177201 Cylicostephanus goldi CGOC_0000177201 I 0.807
Alx3 Dipodomys ordii ENSDORG00000007888 I 0.802
nDi.2.2.2.g10727 Dirofilaria immitis nDi.2.2.2.g10727 I 0.789
unc-4 Drosophila melanogaster FBgn0024184 D 0.770
ENSETEG00000014353 Echinops telfairi ENSETEG00000014353 I 0.802
ENSFALG00000013932 Ficedula albicollis ENSFALG00000013932 I 0.811
ENSGMOG00000004901 Gadus morhua ENSGMOG00000004901 I 0.811
ENSGMOG00000019823 Gadus morhua ENSGMOG00000019823 I 0.794
ENSGACG00000019556 Gasterosteus aculeatus ENSGACG00000019556 I 0.794
ENSGACG00000014079 Gasterosteus aculeatus ENSGACG00000014079 I 0.811
ISCW016208 Ixodes scapularis ISCW016208 I 0.807
LDEC019585 Leptinotarsa decemlineata LDEC019585 I 0.760
LCUP011771 Lucilia cuprina LCUP011771 I 0.758
ENSMEUG00000013672 Macropus eugenii ENSMEUG00000013672 I 0.790
ENSMEUG00000014947 Macropus eugenii ENSMEUG00000014947 I 0.806
MhA1_Contig1356.frz3.gene13 Meloidogyne hapla MhA1_Contig1356.frz3.gene13 I 0.651
Minc04295 Meloidogyne incognita Minc04295 N 0.000
Minc15545 Meloidogyne incognita Minc15545 N 0.000
ENSMICG00000010576 Microcebus murinus ENSMICG00000010576 I 0.000
SHOX Microcebus murinus ENSMICG00000014601 I 0.790
Uncx Mus musculus ENSMUSG00000029546 D 0.811
NECAME_14560 Necator americanus NECAME_14560 I 0.789
OFLC_0000877001 Onchocerca flexuosa OFLC_0000877001 I 0.819
nOo.2.0.1.g10008 Onchocerca ochengi nOo.2.0.1.g10008 I 0.811
Ogr11689 Ophisaurus gracilis Ogr11689 I 0.794
Ogr00343 Ophisaurus gracilis Ogr00343 N 0.000
ENSOANG00000030226 Ornithorhynchus anatinus ENSOANG00000030226 I 0.757
PHUM093500 Pediculus humanus PHUM093500 I 0.760
PPAI007394 Phlebotomus papatasi PPAI007394 I 0.760
ARX Procavia capensis ENSPCAG00000011497 I 0.806
ALX3 Procavia capensis ENSPCAG00000012660 I 0.802
RPRC011714 Rhodnius prolixus RPRC011714 I 0.713
nRc.2.0.1.g07191 Romanomermis culicivorax nRc.2.0.1.g07191 I 0.000
SBAD_0000293901 Soboliphyme baturini SBAD_0000293901 I 0.807
SINV11802 Solenopsis invicta SINV11802 I 0.796
L889_g17262 Steinernema feltiae L889_g17262 N 0.000
SPU_013704 Strongylocentrotus purpuratus SPU_013704 I 0.794
ENSTGUG00000016719 Taeniopygia guttata ENSTGUG00000016719 I 0.810
ALX4 Taeniopygia guttata ENSTGUG00000010263 I 0.000
uncx Takifugu rubripes ENSTRUG00000013503 I 0.794
SHOX Tupaia belangeri ENSTBEG00000008957 I 0.790
Tal_R007109 Tyto alba Tal_R007109 I 0.806
WUBG_04568 Wuchereria bancrofti WUBG_04568 I 0.807
uncx.L Xenopus laevis XB-GENE-920204 I 0.811
ENSXMAG00000020166 Xiphophorus maculatus ENSXMAG00000020166 I 0.757