Cla014693 (Citrullus lanatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cla014693 T225603_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.726 0.895
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.726 0.895
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.714 0.877
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.714 0.877
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.704 0.772
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.688 0.737
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.688 0.737
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.664 0.702
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.664 0.702
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.663 0.632
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.648 0.737
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.648 0.737
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.648 0.737
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.606 0.667
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.606 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla014693 Homeodomain 46 103

Links

Other Homeodomain family TFs
Other Citrullus lanatus TFs

573 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCC4DRAFT_190319 Bipolaris maydis COCC4DRAFT_190319 N
COCMIDRAFT_89586 Bipolaris oryzae COCMIDRAFT_89586 N
COCSADRAFT_339916 Bipolaris sorokiniana COCSADRAFT_339916 N
COCVIDRAFT_94626 Bipolaris victoriae COCVIDRAFT_94626 N
COCCADRAFT_24165 Bipolaris zeicola COCCADRAFT_24165 N
Bcin01g06570 Botrytis cinerea Bcin01g06570 N
A1O1_05793 Capronia coronata A1O1_05793 N
A1O3_03567 Capronia epimyces A1O3_03567 N
PV04_01162 Capronia semiimmersa PV04_01162 N
Z519_09074 Cladophialophora bantiana Z519_09074 N
PV07_02098 Cladophialophora immunda PV07_02098 N
A1O5_06590 Cladophialophora psammophila A1O5_06590 N
estExt_Genewise1Plus.C_30684 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_30684 N
W97_03506 Coniosporium apollinis W97_03506 N
PV11_07979 Exophiala sideris PV11_07979 N
PV08_05573 Exophiala spinifera PV08_05573 N
PV05_11914 Exophiala xenobiotica PV05_11914 N
Z517_07750 Fonsecaea pedrosoi Z517_07750 N
LEMA_P026340.1 Leptosphaeria maculans LEMA_P026340.1 N
MPH_00536 Macrophomina phaseolina MPH_00536 N
UCRNP2_4518 Neofusicoccum parvum UCRNP2_4518 N
OIDMADRAFT_179337 Oidiodendron maius OIDMADRAFT_179337 N
SNOG_04741 Phaeosphaeria nodorum SNOG_04741 N
GMDG_00068 Pseudogymnoascus destructans GMDG_00068 N
PTT_10593 Pyrenophora teres PTT_10593 N
PTRG_07876 Pyrenophora triticirepentis PTRG_07876 N
SBOR_0727 Sclerotinia borealis SBOR_0727 N
SETTUDRAFT_106188 Setosphaeria turcica SETTUDRAFT_106188 N
SNOG_04741 Stagonospora nodorum SNOG_04741 N
PV09_01633 Verruconis gallopava PV09_01633 N