Cla015624 (Citrullus lanatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cla015624 T225607_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.810 0.735
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.571
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.602 0.429
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.602 0.429
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.602 0.429
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.602 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla015624 Homeodomain 344 395

Links

Other Homeodomain family TFs
Other Citrullus lanatus TFs

1001 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_11141 Colletotrichum fioriniae CFIO01_11141 N 0.000
Cob_04961 Colletotrichum orbiculare Cob_04961 N 0.000
CCM_07676 Cordyceps militaris CCM_07676 N 0.000
FFUJ_12685 Fusarium fujikuroi FFUJ_12685 N 0.000
FOXG_14560 Fusarium oxysporum FOXG_14560 N 0.000
GGTG_13186 Gaeumannomyces graminis GGTG_13186 N 0.000
MAPG_08844 Magnaporthe poae MAPG_08844 N 0.000
MBR_06285 Metarhizium brunneum MBR_06285 N 0.000
MGU_08690 Metarhizium guizhouense MGU_08690 N 0.000
MAJ_06580 Metarhizium majus MAJ_06580 N 0.000
X797_007609 Metarhizium robertsii X797_007609 N 0.000
S40285_06609 Stachybotrys chlorohalonata S40285_06609 N 0.000
TRIATDRAFT_164285 Trichoderma atroviride TRIATDRAFT_164285 N 0.000
TRIREDRAFT_104104 Trichoderma reesei TRIREDRAFT_104104 N 0.000
TRIREDRAFT_109328 Trichoderma reesei TRIREDRAFT_109328 N 0.000
TRIVIDRAFT_133633 Trichoderma virens TRIVIDRAFT_133633 N 0.000
VDBG_09138 Verticillium albo atrum VDBG_09138 N 0.000
VDBG_09138 Verticillium alfalfae VDBG_09138 N 0.000
VDAG_07288 Verticillium dahliae VDAG_07288 N 0.000