Hsal_06667--XP_001121341.1_APIME (Harpegnathos saltator)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Hsal_06667--XP_001121341.1_APIME T226284_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.686 0.435
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.686 0.435
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.686 0.435
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.653 0.304
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.653 0.304
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.653 0.304
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.653 0.304
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.653 0.304
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.653 0.304
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.653 0.304
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.653 0.304
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.653 0.304
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hsal_06667--XP_001121341.1_APIME Homeodomain 441 486

Links

Other Homeodomain family TFs
Other Harpegnathos saltator TFs

1086 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.4.390.1 Phytophthora capsici e_gw1.4.390.1 I
PITG_14364 Phytophthora infestans PITG_14364 I
fgenesh_scip_prom.46568.10732 Phytophthora kernoviae fgenesh_scip_prom.46568.10732 I
fgenesh_scip_prom.28083.4862 Phytophthora lateralis fgenesh_scip_prom.28083.4862 N
F443_20633 Phytophthora parasitica F443_20633 I
Phyra80899 Phytophthora ramorum Phyra80899 N
Physo132994 Phytophthora sojae Physo132994 I
maker-pag1_scaffold_490-fgenesh-gene-0.0 Pythium aphanidermatum maker-pag1_scaffold_490-fgenesh-gene-0.0 N
maker-pag1_scaffold_4-fgenesh-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_4-fgenesh-gene-0.4 I
maker-par_contig_5774-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_5774-fgenesh-gene-0.0 I
maker-pir_contig_1153-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1153-fgenesh-gene-0.2 I
maker-pir_contig_210-snap-gene-0.17 Pythium irregulare maker-pir_contig_210-snap-gene-0.17 N
maker-pve_contig_695-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_695-fgenesh-gene-0.3 I
SPRG_12481 Saprolegnia parasitica SPRG_12481 N