29736.m002010 (Ricinus communis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 29736.m002010 T226973_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.867 1.000
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.867 1.000
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.827 0.804
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.815 0.821
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.815 0.821
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.815 0.821
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.815 0.821
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.801 0.804
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.801 0.804
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.801 0.804
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.801 0.804
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.796 0.786
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.796 0.786
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.796 0.786
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.796 0.786
ATHB-21
M06907_2.00 		Arabidopsis thaliana
NNWHCAATWATTDN
NHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB21_col_a 		0.737 0.625
ATHB-21
M06908_2.00 		Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN
NNAHCAATWATTDNNNHHWW		 Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a 		0.737 0.625
HB-5
M06924_2.00 		Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH
DWWDNNNHMAATWATTGDTNN		 Dap-seq
OMalley et al.(2016)
ATHB40_col_a 		0.736 0.607
HB-5
M06925_2.00 		Arabidopsis thaliana
HHAATWATTGDWNN
NNWHCAATWATTDD		 Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a 		0.736 0.607
ATHB-53
M06934_2.00 		Arabidopsis thaliana
HMAATAATTRD
HYAATTATTKD		 Dap-seq
OMalley et al.(2016)
ATHB53_col_a 		0.731 0.571
ATHB-53
M06935_2.00 		Arabidopsis thaliana
NNWHCAATWATTDDN
NHHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a 		0.731 0.571
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.720 0.893
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.720 0.893
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.704 0.857
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.704 0.857
ATHB-7
M02043_2.00 		Arabidopsis thaliana
NHWTGATTGN
NCAATCAWDN		 PBM
Weirauch et al.(2014)
pTH8090 		0.601 0.625
ATHB-7
M06911_2.00 		Arabidopsis thaliana
NHYCAATCATTSW
WSAATGATTGRDN		 Dap-seq
OMalley et al.(2016)
ATHB7_col_a 		0.601 0.625
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29736.m002010 Homeodomain 82 137

Links

Other Homeodomain family TFs
Other Ricinus communis TFs

819 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018841 Ailuropoda melanoleuca ENSAMEG00000018841 I 0.000
Alligator_sinensis_CCG006462.1 Alligator sinensis Alligator_sinensis_CCG006462.1 I 0.000
ENSAPLG00000000568 Anas platyrhynchos ENSAPLG00000000568 I 0.000
CEBPG Anolis carolinensis ENSACAG00000013617 I 0.000
AATE011183 Anopheles atroparvus AATE011183 I 0.000
ASIS008585 Anopheles sinensis ASIS008585 I 0.000
Afo_R014000 Aptenodytes forsteri Afo_R014000 I 0.000
ENSAMXG00000026123 Astyanax mexicanus ENSAMXG00000026123 I 0.000
ENSBTAP00000023345-D1 Bos grunniens ENSBTAP00000023345-D1 I 0.000
CEBPG Bos taurus ENSBTAG00000017560 I 0.000
estExt_fgenesh2_pg.C_760066 Branchiostoma floridae estExt_fgenesh2_pg.C_760066 I 0.000
estExt_fgenesh2_pg.C_570127 Branchiostoma floridae estExt_fgenesh2_pg.C_570127 I 0.000
Brh_R009933 Buceros rhinoceros Brh_R009933 I 0.000
CEBPG Callithrix jacchus ENSCJAG00000035363 I 0.000
Aan_R003393 Calypte anna Aan_R003393 I 0.000
CEBPG Canis familiaris ENSCAFG00000007405 I 0.000
ENSCPOG00000014835 Cavia porcellus ENSCPOG00000014835 I 0.000
Cmyd_10014706 Chelonia mydas Cmyd_10014706 I 0.000
ENSCSAG00000018517 Chlorocebus sabaeus ENSCSAG00000018517 I 0.000
KGM_20079 Danaus plexippus KGM_20079 I 0.000
cebpg Danio rerio ENSDARG00000036073 I 0.000
CEBPG Dasypus novemcinctus ENSDNOG00000003950 I 0.000
YQE_08773 Dendroctonus ponderosae YQE_08773 I 0.000
CEBPG Echinops telfairi ENSETEG00000017071 I 0.000
CEBPG Equus caballus ENSECAG00000004879 I 0.000
CEBPG Erinaceus europaeus ENSEEUG00000012797 I 0.000
CEBPG Felis catus ENSFCAG00000028096 I 0.000
ENSFALG00000014352 Ficedula albicollis ENSFALG00000014352 I 0.000
ENSGALG00000004867 Gallus gallus ENSGALG00000004867 I 0.000
cebpg Gasterosteus aculeatus ENSGACG00000017539 I 0.000
Gfo_R009960 Geospiza fortis Gfo_R009960 I 0.000
HMEL013192 Heliconius melpomene HMEL013192 I 0.000
CEBPG Homo sapiens ENSG00000153879 D 0.000
ENSSTOG00000007596 Ictidomys tridecemlineatus ENSSTOG00000007596 I 0.000
ENSLACG00000005088 Latimeria chalumnae ENSLACG00000005088 I 0.000
ENSLOCG00000017587 Lepisosteus oculatus ENSLOCG00000017587 I 0.000
LDEC004833 Leptinotarsa decemlineata LDEC004833 I 0.000
CEBPG Loxodonta africana ENSLAFG00000017998 I 0.000
ENSP00000284000 Macaca fascicularis ENSP00000284000 I 0.000
CEBPG Macaca mulatta ENSMMUG00000006127 I 0.000
CEBPG Meleagris gallopavo ENSMGAG00000015603 I 0.000
ENSMICG00000013426 Microcebus murinus ENSMICG00000013426 I 0.000
CEBPG Monodelphis domestica ENSMODG00000023494 I 0.000
ENSMPUG00000018937 Mustela putorius furo ENSMPUG00000018937 I 0.000
Cebpg Mus musculus ENSMUSG00000056216 D 0.000
Myotis_brandtii_CEBPG_10035215 Myotis brandtii Myotis_brandtii_CEBPG_10035215 I 0.000
CEBPG Myotis lucifugus ENSMLUG00000005181 I 0.000
ENSNLEG00000018562 Nomascus leucogenys ENSNLEG00000018562 I 0.000
CEBPG Ochotona princeps ENSOPRG00000012139 I 0.000
Ogr04139 Ophisaurus gracilis Ogr04139 I 0.000
ENSONIG00000020606 Oreochromis niloticus ENSONIG00000020606 I 0.000
CEBPG Ornithorhynchus anatinus ENSOANG00000008143 I 0.000
CEBPG Oryctolagus cuniculus ENSOCUG00000017036 I 0.000
cebpg Oryzias latipes ENSORLG00000018652 I 0.000
CEBPG Otolemur garnettii ENSOGAG00000010436 I 0.000
ENSOARG00000011183 Ovis aries ENSOARG00000011183 I 0.000
CEBPG Pan troglodytes ENSPTRG00000010808 I 0.000
ENSPANG00000016413 Papio anubis ENSPANG00000016413 I 0.000
ENSPSIG00000000373 Pelodiscus sinensis ENSPSIG00000000373 I 0.000
Pvit_06802 Pogona vitticeps Pvit_06802 I 0.000
ENSPPYG00000009828 Pongo abelii ENSPPYG00000009828 I 0.000
CEBPG Pteropus vampyrus ENSPVAG00000012689 I 0.000
Cebpg Rattus norvegicus ENSRNOG00000021144 I 0.000
ENSSHAG00000014577 Sarcophilus harrisii ENSSHAG00000014577 I 0.000
CEBPG Sorex araneus ENSSARG00000004224 I 0.000
CEBPG Sus scrofa ENSSSCG00000002867 I 0.000
CEBPG Taeniopygia guttata ENSTGUG00000009474 I 0.000
cebpg Takifugu rubripes ENSTRUG00000006448 I 0.000
ENSTSYG00000002513 Tarsius syrichta ENSTSYG00000002513 I 0.000
tetur11g01620 Tetranychus urticae tetur11g01620 I 0.000
tetur02g05060 Tetranychus urticae tetur02g05060 I 0.000
cebpg Tetraodon nigroviridis ENSTNIG00000001629 I 0.000
TC009211 Tribolium castaneum TC009211 I 0.000
Tal_R011314 Tyto alba Tal_R011314 I 0.000
CEBPG Vicugna pacos ENSVPAG00000007215 I 0.000
cebpg.L Xenopus laevis XB-GENE-6077777 I 0.000
cebpg Xenopus tropicalis XB-GENE-919758 I 0.000
ENSXMAG00000019691 Xiphophorus maculatus ENSXMAG00000019691 I 0.000