CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_18000074
(
Phanerochaete chrysosporium
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgenesh1_pg.C_scaffold_18000074
T227471_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_18000074
Homeodomain
42
98
RRTRKRFTSTQLMMLEHLYHQTSHPTREQREALAKEASIELRSVTVWFQNKRQTERK
Links
Other
Homeodomain
family TFs
Other
Phanerochaete chrysosporium
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_189288
Agaricus bisporus
AGABI2DRAFT_189288
N
0.771
M378DRAFT_174679
Amanita muscaria
M378DRAFT_174679
N
0.708
BOTBODRAFT_56815
Botryobasidium botryosum
BOTBODRAFT_56815
N
0.690
CERSUDRAFT_110850
Ceriporiopsis subvermispora
CERSUDRAFT_110850
N
0.752
CC1G_00612
Coprinopsis cinerea
CC1G_00612
N
0.770
FIBRA_04336
Fibroporia radiculosa
FIBRA_04336
I
0.652
GALMADRAFT_132473
Galerina marginata
GALMADRAFT_132473
N
0.770
GLOTRDRAFT_134845
Gloeophyllum trabeum
GLOTRDRAFT_134845
N
0.724
M413DRAFT_6767
Hebeloma cylindrosporum
M413DRAFT_6767
N
0.770
HETIRDRAFT_431289
Heterobasidion irregulare
HETIRDRAFT_431289
N
0.720
JAAARDRAFT_44019
Jaapia argillacea
JAAARDRAFT_44019
N
0.758
K443DRAFT_677749
Laccaria amethystina
K443DRAFT_677749
N
0.772
PAXINDRAFT_100475
Paxillus involutus
PAXINDRAFT_100475
N
0.781
PAXRUDRAFT_824657
Paxillus rubicundulus
PAXRUDRAFT_824657
N
0.777
PHACADRAFT_204947
Phanerochaete carnosa
PHACADRAFT_204947
N
0.862
PHLGIDRAFT_50338
Phlebiopsis gigantea
PHLGIDRAFT_50338
N
0.853
PISMIDRAFT_671894
Pisolithus microcarpus
PISMIDRAFT_671894
N
0.784
M404DRAFT_137431
Pisolithus tinctorius
M404DRAFT_137431
N
0.784
PLEOSDRAFT_1075550
Pleurotus ostreatus
PLEOSDRAFT_1075550
I
0.618
POSPLDRAFT_106191
Postia placenta
POSPLDRAFT_106191
N
0.712
SCLCIDRAFT_119671
Scleroderma citrinum
SCLCIDRAFT_119671
N
0.776
SERLA73DRAFT_78978
Serpula lacrymans
SERLA73DRAFT_78978
N
0.692
SPPG_03931
Spizellomyces punctatus
SPPG_03931
I
0.605
CY34DRAFT_810493
Suillus luteus
CY34DRAFT_810493
N
0.781
BN946_scf184867.g15
Trametes cinnabarina
BN946_scf184867.g15
N
0.754
M407DRAFT_128179
Tulasnella calospora
M407DRAFT_128179
N
0.639