Ocbimv22003567m.g (Octopus bimaculoides)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ocbimv22003567m.g T227771_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.751 0.489
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.751 0.489
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.751 0.489
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.751 0.489
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.751 0.489
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.751 0.489
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.751 0.489
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.751 0.489
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.751 0.489
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.737 0.400
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.737 0.400
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.737 0.400
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22003567m.p Homeodomain 25 69

Links

Other Homeodomain family TFs
Other Octopus bimaculoides TFs

1231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00001 Aegilops tauschii F775_00001 N 0.000
F775_11444 Aegilops tauschii F775_11444 N 0.000
MLOC_60965 Hordeum vulgare MLOC_60965 N 0.000
Traes_1BL_A75EDBFD9 Triticum aestivum Traes_1BL_A75EDBFD9 N 0.000
Traes_2BS_3CA0FC03E Triticum aestivum Traes_2BS_3CA0FC03E N 0.000
Traes_2DL_01DEC201E Triticum aestivum Traes_2DL_01DEC201E N 0.000
Traes_3AL_29AD9D378 Triticum aestivum Traes_3AL_29AD9D378 N 0.000
Traes_7AS_DE61FE07F Triticum aestivum Traes_7AS_DE61FE07F N 0.000
Traes_7DS_EB10DBA07 Triticum aestivum Traes_7DS_EB10DBA07 N 0.000
TRIUR3_06404 Triticum urartu TRIUR3_06404 N 0.000
TRIUR3_13794 Triticum urartu TRIUR3_13794 N 0.000
TRIUR3_17083 Triticum urartu TRIUR3_17083 N 0.000