Ocbimv22024516m.g (Octopus bimaculoides)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ocbimv22024516m.g T227815_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.799 0.622
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.799 0.622
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.799 0.622
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.799 0.622
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.799 0.622
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.799 0.622
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.799 0.622
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.799 0.622
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.799 0.622
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.731 0.356
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.731 0.356
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.731 0.356
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22024516m.p Homeodomain 22 66

Links

Other Homeodomain family TFs
Other Octopus bimaculoides TFs

1246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000011823 Ailuropoda melanoleuca ENSAMEG00000011823 I 0.000
Alligator_sinensis_CCG017947.1 Alligator sinensis Alligator_sinensis_CCG017947.1 I 0.000
Afo_R010037 Aptenodytes forsteri Afo_R010037 I 0.000
ENSP00000352516-D1 Bos grunniens ENSP00000352516-D1 I 0.000
DNMT1 Bos taurus ENSBTAG00000002736 I 0.000
DNMT1 Callithrix jacchus ENSCJAG00000005794 I 0.000
Aan_R006371 Calypte anna Aan_R006371 I 0.000
DNMT1 Canis familiaris ENSCAFG00000017892 I 0.000
DNMT1 Cavia porcellus ENSCPOG00000019557 I 0.000
Cmyd_10002310 Chelonia mydas Cmyd_10002310 I 0.000
ENSCSAG00000007378 Chlorocebus sabaeus ENSCSAG00000007378 I 0.000
DNMT1 Dasypus novemcinctus ENSDNOG00000003313 I 0.000
DNMT1 Equus caballus ENSECAG00000026909 I 0.000
DNMT1 Felis catus ENSFCAG00000012246 I 0.000
ENSFALG00000007760 Ficedula albicollis ENSFALG00000007760 I 0.000
ENSGALG00000028997 Gallus gallus ENSGALG00000028997 I 0.000
Gfo_R002685 Geospiza fortis Gfo_R002685 I 0.000
DNMT1 Gorilla gorilla ENSGGOG00000016574 I 0.000
DNMT1 Homo sapiens ENSG00000130816 D 0.000
ENSSTOG00000010841 Ictidomys tridecemlineatus ENSSTOG00000010841 I 0.000
ENSP00000352516 Macaca fascicularis ENSP00000352516 I 0.000
DNMT1 Macaca mulatta ENSMMUG00000014604 I 0.000
ENSMEUG00000012650 Macropus eugenii ENSMEUG00000012650 I 0.000
DNMT1 Microcebus murinus ENSMICG00000010231 I 0.000
DNMT1 Monodelphis domestica ENSMODG00000005463 I 0.000
ENSMPUG00000006829 Mustela putorius furo ENSMPUG00000006829 I 0.000
Dnmt1 Mus musculus ENSMUSG00000004099 I 0.000
Myotis_brandtii_DNMT1_10007965 Myotis brandtii Myotis_brandtii_DNMT1_10007965 I 0.000
DNMT1 Myotis lucifugus ENSMLUG00000001347 I 0.000
ENSNLEG00000012092 Nomascus leucogenys ENSNLEG00000012092 I 0.000
DNMT1 Ochotona princeps ENSOPRG00000007032 I 0.000
Ogr12994 Ophisaurus gracilis Ogr12994 I 0.000
ENSOANG00000012255 Ornithorhynchus anatinus ENSOANG00000012255 I 0.000
ENSOCUG00000008415 Oryctolagus cuniculus ENSOCUG00000008415 I 0.000
ENSOARG00000015380 Ovis aries ENSOARG00000015380 I 0.000
DNMT1 Pan troglodytes ENSPTRG00000010461 I 0.000
ENSPANG00000001264 Papio anubis ENSPANG00000001264 I 0.000
ENSPSIG00000002916 Pelodiscus sinensis ENSPSIG00000002916 I 0.000
ENSPPYG00000009545 Pongo abelii ENSPPYG00000009545 I 0.000
DNMT1 Procavia capensis ENSPCAG00000011023 I 0.000
DNMT1 Pteropus vampyrus ENSPVAG00000003676 I 0.000
Dnmt1 Rattus norvegicus ENSRNOG00000039859 I 0.000
ENSSHAG00000008894 Sarcophilus harrisii ENSSHAG00000008894 I 0.000
DNMT1 Sus scrofa ENSSSCG00000013659 I 0.000
ENSTGUG00000013708 Taeniopygia guttata ENSTGUG00000013708 I 0.000
DNMT1 Tursiops truncatus ENSTTRG00000003178 I 0.000
DNMT1 Vicugna pacos ENSVPAG00000006117 I 0.000