CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Sakowv30037724m.g *(Saccoglossus kowalevskii)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	Sakowv30037724m.g	T227977_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ENSTNIG00000017092 M02109_2.00	Tetraodon nigroviridis	YYAATCAD	HTGATTRR	PBM Weirauch et al.(2014) pTH6064	0.777	0.509
Q4RRY4_TETNG M02169_2.00	Tetraodon nigroviridis	NNYAATYAN	NTRATTRNN	PBM Weirauch et al.(2014) pTH6326	0.723	0.491
ESX1 M00291_2.00	Homo sapiens	NNTRATNRN	NYNATYANN	PBM Barrera et al.(2016) ESX1_K193R	0.697	0.509
PHOX2B M00282_2.00	Homo sapiens	TAATTRRY	RYYAATTA	PBM Barrera et al.(2016) PHOX2B_REF	0.679	0.614
Phox2a M00400_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2a_3947	0.679	0.614
Phox2b M00401_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2b_3948	0.679	0.614
PHOX2A M03194_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2A_1	0.679	0.614
PHOX2B M03113_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_1	0.679	0.614
PHOX2B M03114_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_2	0.679	0.614
PHOX2A M05244_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_HT-SELEX	0.679	0.614
PHOX2B M05008_2.00	Homo sapiens	BTAATYRV	BYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_HT-SELEX	0.679	0.614
PHOX2B M05010_2.00	Homo sapiens	TAATTWRATTA	TAATYWAATTA	SELEX Yin et al.(2017) PHOX2B_FL_HT-SELEX	0.679	0.614
Phox2a M09564_2.00	Mus musculus	NTAATBNRATTA	TAATYNVATTAN	Misc Heinz et al.(2010) Neuron-Phox2a_GSE31456	0.679	0.614
PHOX2A M05245_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_Methyl-HT-SELEX	0.679	0.614
PHOX2B M05009_2.00	Homo sapiens	BTAATYRN	NYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_Methyl-HT-SELEX	0.679	0.614
PHOX2B M05011_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Yin et al.(2017) PHOX2B_FL_Methyl-HT-SELEX	0.679	0.614
PHOX2B M00280_2.00	Homo sapiens	NNNHATAAWTDNN	NNHAWTTATDNNN	PBM Barrera et al.(2016) PHOX2B_R141G	0.679	0.596
PHOX2B M00281_2.00	Homo sapiens	NNNNNNNNRY	RYNNNNNNNN	PBM Barrera et al.(2016) PHOX2B_R141Q	0.679	0.596
mixl1.S M02233_2.00	Xenopus laevis	NHTAATTAANN	NNTTAATTADN	PBM Weirauch et al.(2014) pTH6163	0.677	0.561
PROP1 M00317_2.00	Homo sapiens	HAAYNNNNNN	NNNNNNRTTD	PBM Barrera et al.(2016) PROP1_REF	0.676	0.579
Prop1 M00498_2.00	Mus musculus	NRAKDDN	NHHMTYN	PBM Berger et al.(2008) Prop1_3949	0.676	0.579
PROP1 M03216_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Jolma et al.(2013) PROP1_1	0.676	0.579
PROP1 M03217_2.00	Homo sapiens	TAATKNRRTTA	TAAYYNMATTA	SELEX Jolma et al.(2013) PROP1_2	0.676	0.579
PROP1 M05298_2.00	Homo sapiens	WAATTNNRTTD	HAAYNNAATTW	SELEX Yin et al.(2017) PROP1_eDBD_HT-SELEX	0.676	0.579
PROP1 M05301_2.00	Homo sapiens	TAATTNVATTA	TAATBNAATTA	SELEX Yin et al.(2017) PROP1_FL_HT-SELEX	0.676	0.579
Prop1 M09210_2.00	Mus musculus	TAATKRRATTA	TAATYYMATTA	Misc Kulakovskiy et al.(2013) PROP1_MOUSE.H11MO.0.C	0.676	0.579
PROP1 M10777_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_01	0.676	0.579
PROP1 M10737_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_Q2	0.676	0.579
PROP1 M05299_2.00	Homo sapiens	TAATTNVRTTW	WAAYBNAATTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_1	0.676	0.579
PROP1 M05300_2.00	Homo sapiens	TAAYNDCRTTA	TAAYGHNRTTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_2	0.676	0.579
PROP1 M05302_2.00	Homo sapiens	TAATTNVRTTA	TAAYBNAATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_1	0.676	0.579
PROP1 M05303_2.00	Homo sapiens	TAATYRVRTTA	TAAYBYRATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_2	0.676	0.579
PROP1 M00315_2.00	Homo sapiens	NNHNATNN	NNATNDNN	PBM Barrera et al.(2016) PROP1_R112Q	0.676	0.561
CG32532 M03874_2.00	Drosophila melanogaster	NTAAYBNVRTTAN	NTAAYBNVRTTAN	SELEX Nitta et al.(2015) CG32532_1	0.673	0.561
CG32532 M06547_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0179.1	0.673	0.561
CG32532 M06370_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) CG32532_Cell_FBgn0052532	0.673	0.561
CG32532 M06371_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG32532_SOLEXA_FBgn0052532	0.673	0.561
Sebox M02097_2.00	Mus musculus	NHTTAATTAN	NTAATTAADN	PBM Weirauch et al.(2014) pTH6379	0.673	0.526
al M03776_2.00	Drosophila melanogaster	TAAYBNVRTTA	TAAYBNVRTTA	SELEX Nitta et al.(2015) al_1	0.672	0.579
al M06477_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0208.1	0.672	0.579
al M06212_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) Al_Cell_FBgn0000061	0.672	0.579
al M06213_2.00	Drosophila melanogaster	NNYTAATTR	YAATTARNN	B1H Zhu et al.(2011) Al_SOLEXA_FBgn0000061	0.672	0.579
Duxbl1 M02099_2.00	Mus musculus	NTGATTRNN	NNYAATCAN	PBM Weirauch et al.(2014) pTH6453	0.672	0.474
DRGX M03199_2.00	Homo sapiens	NTAATTNRATTAN	NTAATYNAATTAN	SELEX Jolma et al.(2013) DRGX_1	0.671	0.632
DRGX M05253_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_HT-SELEX	0.671	0.632
Drgx M10774_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRRXL1_01	0.671	0.632
DRGX M05254_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) DRGX_eDBD_Methyl-HT-SELEX	0.671	0.632
CG2808 M03875_2.00	Drosophila melanogaster	TAATYNSRTTA	TAAYSNRATTA	SELEX Nitta et al.(2015) CG2808_1	0.671	0.596
Pph13 M03845_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Pph13_1	0.669	0.544
Pph13 M06522_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Mathelier et al.(2014) MA0200.1	0.669	0.544
Pph13 M06321_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Pph13_Cell_FBgn0023489	0.669	0.544
Pph13 M06322_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Pph13_SOLEXA_FBgn0023489	0.669	0.544
PROP1 M00316_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) PROP1_R99Q	0.668	0.561
PHDP M03849_2.00	Drosophila melanogaster	NTAATKNVATTAN	NTAATBNMATTAN	SELEX Nitta et al.(2015) PHDP_1	0.668	0.544
PHDP M06525_2.00	Drosophila melanogaster	HTAATTD	HAATTAD	B1H Mathelier et al.(2014) MA0457.1	0.668	0.544
PHDP M06325_2.00	Drosophila melanogaster	HTAATT	AATTAD	B1H Zhu et al.(2011) PhdP_Cell_FBgn0025334	0.668	0.544
PHDP M06326_2.00	Drosophila melanogaster	YTAATT	AATTAR	B1H Zhu et al.(2011) PhdP_SOLEXA_FBgn0025334	0.668	0.544
SNAPOd2T00006145001 M02230_2.00	Oikopleura dioica	NNTRATKRNN	NNYMATYANN	PBM Weirauch et al.(2014) pTH5930	0.665	0.404
Alx1 M00471_2.00	Mus musculus	NTAATTRN	NYAATTAN	PBM Berger et al.(2008) Cart1_0997	0.664	0.579
Alx1 M00472_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Cart1_1275	0.664	0.579
Alx4 M00487_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Alx4_1744	0.664	0.579
ALX4 M03079_2.00	Homo sapiens	NTAATYNRRTTAN	NTAAYYNRATTAN	SELEX Jolma et al.(2013) ALX4_1	0.664	0.579
ALX1 M03226_2.00	Homo sapiens	NTAATTRVRTTAN	NTAAYBYAATTAN	SELEX Jolma et al.(2013) CART1_1	0.664	0.579
Alx1 M03272_2.00	Mus musculus	NNTAATTRRD	HYYAATTANN	SELEX Jolma et al.(2013) Alx1_1	0.664	0.579
Alx1 M03273_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx1_2	0.664	0.579
Alx4 M03278_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Alx4_1	0.664	0.579
ALX1 M05327_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_HT-SELEX	0.664	0.579
ALX4 M04917_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_HT-SELEX	0.664	0.579
ALX1 M09160_2.00	Homo sapiens	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_HUMAN.H11MO.0.B	0.664	0.579
Alx1 M09201_2.00	Mus musculus	VTAATYRVATTA	TAATBYRATTAB	Misc Kulakovskiy et al.(2013) ALX1_MOUSE.H11MO.0.B	0.664	0.579
ALX4 M10637_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ALX4_01	0.664	0.579
ALX1 M10741_2.00	Homo sapiens	VVHTAATKNNHATTABYN	NRVTAATDNNMATTADBB	Transfac Matys et al.(2006) V$CART1_01	0.664	0.579
ALX1 M05328_2.00	Homo sapiens	TAATYTAATTA	TAATTARATTA	SELEX Yin et al.(2017) ALX1_FL_Methyl-HT-SELEX	0.664	0.579
ALX4 M04918_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_1	0.664	0.579
ALX4 M04919_2.00	Homo sapiens	NTWAYGHN	NDCRTWAN	SELEX Yin et al.(2017) ALX4_eDBD_Methyl-HT-SELEX_2	0.664	0.579
ARX M00264_2.00	Homo sapiens	NNWRATNNN	NNNATYWNN	PBM Barrera et al.(2016) ARX_REF	0.664	0.561
Alx3 M00402_2.00	Mus musculus	WAATNDN	NHNATTW	PBM Berger et al.(2008) Alx3_3418	0.664	0.561
Uncx M00443_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Uncx4	0.664	0.561
Arx M00467_2.00	Mus musculus	NTAATTDN	NHAATTAN	PBM Berger et al.(2008) Arx_1738	0.664	0.561
uncx M02111_2.00	Tetraodon nigroviridis	NNTAATTRN	NYAATTANN	PBM Weirauch et al.(2014) pTH5474	0.664	0.561
ALX3 M03172_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_1	0.664	0.561
ALX3 M03173_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ALX3_2	0.664	0.561
ALX3 M03174_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ALX3_3	0.664	0.561
ARX M03076_2.00	Homo sapiens	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) ARX_1	0.664	0.561
UNCX M03191_2.00	Homo sapiens	NWAATTVVRTHWN	NWDAYBBAATTWN	SELEX Jolma et al.(2013) UNCX_1	0.664	0.561
UNCX M03192_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) UNCX_2	0.664	0.561
Arx M03269_2.00	Mus musculus	NTAATYNRATTAN	NTAATYNRATTAN	SELEX Jolma et al.(2013) Arx_1	0.664	0.561
Uncx M03264_2.00	Mus musculus	NTAATTVRATTAN	NTAATYBAATTAN	SELEX Jolma et al.(2013) Uncx_1	0.664	0.561
Uncx M03265_2.00	Mus musculus	NTAATTRR	YYAATTAN	SELEX Jolma et al.(2013) Uncx_2	0.664	0.561
ALX3 M05195_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_HT-SELEX	0.664	0.561
ALX3 M05198_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_HT-SELEX	0.664	0.561
ARX M04895_2.00	Homo sapiens	BTAATTRR	YYAATTAV	SELEX Yin et al.(2017) ARX_eDBD_HT-SELEX	0.664	0.561
UNCX M05240_2.00	Homo sapiens	NYAATTRV	BYAATTRN	SELEX Yin et al.(2017) UNCX_eDBD_HT-SELEX	0.664	0.561
Arx M10775_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ARX_05	0.664	0.561
ARX M04896_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ARX_eDBD_Methyl-HT-SELEX	0.664	0.561
UNCX M05241_2.00	Homo sapiens	NYRRYKNN	NNMRYYRN	SELEX Yin et al.(2017) UNCX_eDBD_Methyl-HT-SELEX	0.664	0.561
ALX3 M05196_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_1	0.664	0.561
ALX3 M05197_2.00	Homo sapiens	NTAAYBHN	NDVRTTAN	SELEX Yin et al.(2017) ALX3_eDBD_Methyl-HT-SELEX_2	0.664	0.561
ALX3 M05199_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_1	0.664	0.561
ALX3 M05200_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) ALX3_FL_Methyl-HT-SELEX_2	0.664	0.561
ARX M00260_2.00	Homo sapiens	NMTAATTANNN	NNNTAATTAKN	PBM Barrera et al.(2016) ARX_L343Q	0.664	0.544
VSX1 M00269_2.00	Homo sapiens	NNWAAYNNN	NNNRTTWNN	PBM Barrera et al.(2016) VSX1_REF	0.664	0.526
VSX2 M00287_2.00	Homo sapiens	NYTAATTARN	NYTAATTARN	PBM Barrera et al.(2016) VSX2_REF	0.664	0.526
Vsx1 M00459_2.00	Mus musculus	NNTAATDDN	NHHATTANN	PBM Berger et al.(2008) Vsx1_1728	0.664	0.526
VSX2 M03124_2.00	Homo sapiens	YTAATTAN	NTAATTAR	SELEX Jolma et al.(2013) VSX2_1	0.664	0.526
Vsx1 M03267_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Vsx1_1	0.664	0.526
VSX2 M05036_2.00	Homo sapiens	CTAATTAN	NTAATTAG	SELEX Yin et al.(2017) VSX2_eDBD_HT-SELEX	0.664	0.526
VSX2 M05039_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_HT-SELEX	0.664	0.526
Vsx2 M09180_2.00	Mus musculus	NNRGCTAATTAR	YTAATTAGCYNN	Misc Kulakovskiy et al.(2013) VSX2_MOUSE.H11MO.0.C	0.664	0.526
VSX2 M10676_2.00	Homo sapiens	HNNGCTAATTANBN	NVNTAATTAGCNND	Transfac Matys et al.(2006) V$CHX10_01	0.664	0.526
VSX1 M00266_2.00	Homo sapiens	NNTAAYNNN	NNNRTTANN	PBM Barrera et al.(2016) VSX1_G160D	0.664	0.526
VSX2 M05037_2.00	Homo sapiens	VYAATTRR	YYAATTRB	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_1	0.664	0.526
VSX2 M05038_2.00	Homo sapiens	NTAAYKHN	NDMRTTAN	SELEX Yin et al.(2017) VSX2_eDBD_Methyl-HT-SELEX_2	0.664	0.526
VSX2 M05040_2.00	Homo sapiens	NTAAYKVN	NBMRTTAN	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_1	0.664	0.526
VSX2 M05041_2.00	Homo sapiens	GCYAATYWY	RWRATTRGC	SELEX Yin et al.(2017) VSX2_FL_Methyl-HT-SELEX_2	0.664	0.526
VSX2 M00285_2.00	Homo sapiens	NDTWTATTHNNN	NNNDAATAWAHN	PBM Barrera et al.(2016) VSX2_R200P	0.664	0.509
VSX2 M00286_2.00	Homo sapiens	YRWKWNN	NNWMWYR	PBM Barrera et al.(2016) VSX2_R200Q	0.664	0.509
CG11294 M03855_2.00	Drosophila melanogaster	TAATTVVATTA	TAATBBAATTA	SELEX Nitta et al.(2015) CG11294_1	0.664	0.544
CG11294 M03856_2.00	Drosophila melanogaster	TAATTDVATTA	TAATBHAATTA	SELEX Nitta et al.(2015) CG11294_2	0.664	0.544
CG11294 M06531_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Mathelier et al.(2014) MA0172.1	0.664	0.544
CG11294 M06337_2.00	Drosophila melanogaster	TAATTAA	TTAATTA	B1H Zhu et al.(2011) CG11294_Cell_FBgn0030058	0.664	0.544
CG11294 M06338_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG11294_SOLEXA_FBgn0030058	0.664	0.544
ARX M00261_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) ARX_P353L	0.664	0.544
ARX M00262_2.00	Homo sapiens	ATAATTAT	ATAATTAT	PBM Barrera et al.(2016) ARX_P353R	0.664	0.544
MIXL1 M03231_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) MIXL1_1	0.663	0.526
MIXL1 M05359_2.00	Homo sapiens	TAATBNVATTA	TAATBNVATTA	SELEX Yin et al.(2017) MIXL1_FL_HT-SELEX	0.663	0.526
MIXL1 M10747_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MIXL1_02	0.663	0.526
Mixl1 M10765_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MIXL1_03	0.663	0.526
MIXL1 M05360_2.00	Homo sapiens	TAATYNRATTA	TAATYNRATTA	SELEX Yin et al.(2017) MIXL1_FL_Methyl-HT-SELEX_1	0.663	0.526
MIXL1 M05361_2.00	Homo sapiens	TAATYDCRTTA	TAAYGHRATTA	SELEX Yin et al.(2017) MIXL1_FL_Methyl-HT-SELEX_2	0.663	0.526
SNAPOd2T00006620001 M02231_2.00	Oikopleura dioica	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5666	0.663	0.561
SHOX M02095_2.00	Homo sapiens	NTAATTRN	NYAATTAN	PBM Weirauch et al.(2014) pTH5805	0.663	0.544
Shox2 M00439_2.00	Mus musculus	NTAATDDN	NHHATTAN	PBM Berger et al.(2008) Shox2_2641	0.663	0.544
SHOX M03232_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) SHOX_1	0.663	0.544
SHOX2 M03204_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) SHOX2_1	0.663	0.544
Shox2 M03263_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Shox2_1	0.663	0.544
CG5369 M03876_2.00	Drosophila melanogaster	TAATTHVATTA	TAATBDAATTA	SELEX Nitta et al.(2015) CG5369_1	0.663	0.544
CG5369 M03877_2.00	Drosophila melanogaster	TAATTRNNTAATBN	NVATTANNYAATTA	SELEX Nitta et al.(2015) CG5369_2	0.663	0.544
CG5369 M03878_2.00	Drosophila melanogaster	TAATTVRATWA	TWATYBAATTA	SELEX Nitta et al.(2015) CG5369_3	0.663	0.544
SHOX M05366_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_HT-SELEX	0.663	0.544
Shox2 M10772_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SHOX2_05	0.663	0.544
SHOX M05367_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_1	0.663	0.544
SHOX M05368_2.00	Homo sapiens	NTAAYGAN	NTCRTTAN	SELEX Yin et al.(2017) SHOX_eDBD_Methyl-HT-SELEX_2	0.663	0.544
hbn M03813_2.00	Drosophila melanogaster	HTAATYTAATTAD	HTAATTARATTAD	SELEX Nitta et al.(2015) hbn_1	0.663	0.544
hbn M06506_2.00	Drosophila melanogaster	TTAATTR	YAATTAA	B1H Mathelier et al.(2014) MA0226.1	0.663	0.544
hbn M06291_2.00	Drosophila melanogaster	TWAWTTR	YAAWTWA	B1H Zhu et al.(2011) Hbn_Cell_FBgn0008636	0.663	0.544
hbn M06292_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Hbn_SOLEXA_FBgn0008636	0.663	0.544
ENSCING00000016045 M02078_2.00	Ciona intestinalis	NNYTAATTRGN	NCYAATTARNN	PBM Weirauch et al.(2014) pTH6551	0.661	0.526
LHX6 M02086_2.00	Homo sapiens	NTRATTRN	NYAATYAN	PBM Weirauch et al.(2014) pTH6556	0.658	0.421
Lhx6 M00434_2.00	Mus musculus	NTRATTRN	NYAATYAN	PBM Berger et al.(2008) Lhx6_2272	0.658	0.421
Lhx6_CONSTRUCT M00539_2.00	PBM CONSTRUCTS	NNTRATTRN	NYAATYANN	PBM Berger et al.(2008) Lhx6_3432	0.658	0.421
LHX6 M03108_2.00	Homo sapiens	VYTAATTAVB	VBTAATTARB	SELEX Jolma et al.(2013) LHX6_1	0.658	0.421
LHX6 M03109_2.00	Homo sapiens	YAATYARYRCTAATTA	TAATTAGYRYTRATTR	SELEX Jolma et al.(2013) LHX6_2	0.658	0.421
LHX6 M03110_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Jolma et al.(2013) LHX6_3	0.658	0.421
LHX6 M04992_2.00	Homo sapiens	CTAATTRV	BYAATTAG	SELEX Yin et al.(2017) LHX6_FL_HT-SELEX_1	0.658	0.421
LHX6 M04993_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Yin et al.(2017) LHX6_FL_HT-SELEX_2	0.658	0.421
LHX6 M05870_2.00	Homo sapiens	NYTRATTR	YAATYARN	SMiLE-seq Isakova et al.(2017) LHX6	0.658	0.421
Lhx6 M09187_2.00	Mus musculus	NYTGATTRV	BYAATCARN	Misc Kulakovskiy et al.(2013) LHX6_MOUSE.H11MO.0.C	0.658	0.421
LHX6 M04994_2.00	Homo sapiens	STAATTAV	BTAATTAS	SELEX Yin et al.(2017) LHX6_FL_Methyl-HT-SELEX_1	0.658	0.421
LHX6 M04995_2.00	Homo sapiens	HTAACGAG	CTCGTTAD	SELEX Yin et al.(2017) LHX6_FL_Methyl-HT-SELEX_2	0.658	0.421
LHX6 M04996_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Yin et al.(2017) LHX6_FL_Methyl-HT-SELEX_3	0.658	0.421
Lhx8 M00534_2.00	Mus musculus	NNTRATKRN	NYMATYANN	PBM Berger et al.(2008) Lhx8_2247	0.658	0.404
Lhx8 M03288_2.00	Mus musculus	BYRATYRVNNBTRATYRN	NYRATYAVNNBYRATYRV	SELEX Jolma et al.(2013) Lhx8_1	0.658	0.404
Lhx8 M03289_2.00	Mus musculus	BYRATYRV	BYRATYRV	SELEX Jolma et al.(2013) Lhx8_2	0.658	0.404
Lhx8 M03290_2.00	Mus musculus	TRATTGCAATYA	TRATTGCAATYA	SELEX Jolma et al.(2013) Lhx8_3	0.658	0.404
LHX8 M05210_2.00	Homo sapiens	STAATTAN	NTAATTAS	SELEX Yin et al.(2017) LHX8_FL_HT-SELEX_1	0.658	0.404
LHX8 M05211_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Yin et al.(2017) LHX8_FL_HT-SELEX_2	0.658	0.404
LHX8 M10713_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LHX8_06	0.658	0.404
LHX8 M05212_2.00	Homo sapiens	STAATYAN	NTRATTAS	SELEX Yin et al.(2017) LHX8_FL_Methyl-HT-SELEX_1	0.658	0.404
LHX8 M05213_2.00	Homo sapiens	NTAACGAB	VTCGTTAN	SELEX Yin et al.(2017) LHX8_FL_Methyl-HT-SELEX_2	0.658	0.404
LHX8 M05214_2.00	Homo sapiens	TRATTGCAATYA	TRATTGCAATYA	SELEX Yin et al.(2017) LHX8_FL_Methyl-HT-SELEX_3	0.658	0.404
HESX1 M00309_2.00	Homo sapiens	HTAATTRGN	NCYAATTAD	PBM Barrera et al.(2016) HESX1_REF	0.654	0.544
HESX1 M00307_2.00	Homo sapiens	TAATTRNN	NNYAATTA	PBM Barrera et al.(2016) HESX1_N125S	0.654	0.544
P79681_ACIBE M02200_2.00	Acipenser baerii	DTAATTRB	VYAATTAH	PBM Weirauch et al.(2014) pTH6156	0.654	0.526
HESX1 M00308_2.00	Homo sapiens	NATAHATRN	NYATDTATN	PBM Barrera et al.(2016) HESX1_R160C	0.654	0.526
vsx2 M02079_2.00	Danio rerio	NNYTAATTARN	NYTAATTARNN	PBM Weirauch et al.(2014) pTH6221	0.652	0.509
VSX1 M00267_2.00	Homo sapiens	NNHAAYNNN	NNNRTTDNN	PBM Barrera et al.(2016) VSX1_Q175H	0.652	0.509
prd-b M02077_2.00	Ciona intestinalis	NTRATTRNN	NNYAATYAN	PBM Weirauch et al.(2014) pTH6284	0.651	0.474
Isx M00452_2.00	Mus musculus	NNHDATNN	NNATHDNN	PBM Berger et al.(2008) Isx_3445	0.650	0.526
Otp M00417_2.00	Mus musculus	NNHAATND	HNATTDNN	PBM Berger et al.(2008) Otp_3496	0.650	0.561
OdsH M03851_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) OdsH_1	0.647	0.544
OdsH M03852_2.00	Drosophila melanogaster	TAATBNVATTA	TAATBNVATTA	SELEX Nitta et al.(2015) OdsH_2	0.647	0.544
OdsH M06528_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0198.1	0.647	0.544
OdsH M06330_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Zhu et al.(2011) Odsh_Cell_FBgn0026058	0.647	0.544
OdsH M06331_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) Odsh_SOLEXA_FBgn0026058	0.647	0.544
PHOX2B M00279_2.00	Homo sapiens	NVTAATTRMNN	NNKYAATTABN	PBM Barrera et al.(2016) PHOX2B_R100L	0.647	0.596
PHOX2B M00278_2.00	Homo sapiens	NNNNNRY	RYNNNNN	PBM Barrera et al.(2016) PHOX2B_Q143R	0.646	0.596
otp M03834_2.00	Drosophila melanogaster	BTAATTRN	NYAATTAV	SELEX Nitta et al.(2015) otp_1	0.644	0.526
otp M03835_2.00	Drosophila melanogaster	YTAATTRV	BYAATTAR	SELEX Nitta et al.(2015) otp_2	0.644	0.526
otp M06516_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0236.1	0.644	0.526
otp M06309_2.00	Drosophila melanogaster	HYTAATTA	TAATTARD	B1H Zhu et al.(2011) Otp_Cell_FBgn0015524	0.644	0.526
otp M06310_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Otp_SOLEXA_FBgn0015524	0.644	0.526
Awh M02121_2.00	Drosophila melanogaster	NNTAATTANN	NNTAATTANN	PBM Weirauch et al.(2014) pTH5759	0.644	0.404
Awh M03831_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) Awh_1	0.644	0.404
Awh M06513_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0167.1	0.644	0.404
Awh M06303_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Zhu et al.(2011) Awh_Cell_FBgn0013751	0.644	0.404
Awh M06304_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Awh_SOLEXA_FBgn0013751	0.644	0.404
lim-4 M02182_2.00	Caenorhabditis elegans	YTAATTRVN	NBYAATTAR	PBM Weirauch et al.(2014) pTH6366	0.644	0.386
A1JVI6_MOUSE M02033_2.00	Mus musculus	HTGATTGN	NCAATCAD	PBM Weirauch et al.(2014) pTH5986	0.642	0.439
unc-4 M03846_2.00	Drosophila melanogaster	TAATTNAATTA	TAATTNAATTA	SELEX Nitta et al.(2015) unc-4_1	0.641	0.544
unc-4 M06523_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0250.1	0.641	0.544
Prrx1 M00431_2.00	Mus musculus	TAATTRNN	NNYAATTA	PBM Berger et al.(2008) Prrx1_3442	0.641	0.561
Prrx2 M00486_2.00	Mus musculus	WRATNNN	NNNATYW	PBM Berger et al.(2008) Prrx2_3072	0.641	0.561
PRRX1 M03120_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) PRRX1_1	0.641	0.561
PRRX1 M03121_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) PRRX1_2	0.641	0.561
PRRX1 M03122_2.00	Homo sapiens	TAATTVRRTTA	TAAYYBAATTA	SELEX Jolma et al.(2013) PRRX1_3	0.641	0.561
PRRX2 M03200_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) PRRX2_1	0.641	0.561
Prrx2 M03277_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Prrx2_1	0.641	0.561
PRRX2 M05262_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PRRX2_FL_HT-SELEX	0.641	0.561
PRRX2 M05258_2.00	Homo sapiens	NTNAYGHN	NDCRTNAN	SELEX Yin et al.(2017) PRRX2_eDBD_HT-SELEX_1	0.641	0.561
PRRX2 M05259_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PRRX2_eDBD_HT-SELEX_2	0.641	0.561
PRRX2 M09156_2.00	Homo sapiens	HTAATTR	YAATTAD	Misc Kulakovskiy et al.(2013) PRRX2_HUMAN.H11MO.0.C	0.641	0.561
Prrx2 M09207_2.00	Mus musculus	HTAATTR	YAATTAD	Misc Kulakovskiy et al.(2013) PRRX2_MOUSE.H11MO.0.C	0.641	0.561
Prrx1 M10770_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PMX1_01	0.641	0.561
PRRX1 M10675_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PMX1_Q6	0.641	0.561
PRRX2 M10735_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRRX2_05	0.641	0.561
PRRX2 M10776_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PRX2_Q2	0.641	0.561
Prrx2 M10767_2.00	Mus musculus	HNVHTAATTRRNHNDW	WHNDNYYAATTADBND	Transfac Matys et al.(2006) V$S8_01	0.641	0.561
PRRX2 M05260_2.00	Homo sapiens	NTAAYGHN	NDCRTTAN	SELEX Yin et al.(2017) PRRX2_eDBD_Methyl-HT-SELEX_1	0.641	0.561
PRRX2 M05261_2.00	Homo sapiens	NTAATYRN	NYRATTAN	SELEX Yin et al.(2017) PRRX2_eDBD_Methyl-HT-SELEX_2	0.641	0.561
PRRX2 M05263_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) PRRX2_FL_Methyl-HT-SELEX_1	0.641	0.561
PRRX2 M05264_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) PRRX2_FL_Methyl-HT-SELEX_2	0.641	0.561
CG9876 M03865_2.00	Drosophila melanogaster	SVTVATBRSN	NSYVATBABS	SELEX Nitta et al.(2015) CG9876_1	0.641	0.544
CG9876 M03866_2.00	Drosophila melanogaster	NTAATTRV	BYAATTAN	SELEX Nitta et al.(2015) CG9876_2	0.641	0.544
CG9876 M03867_2.00	Drosophila melanogaster	TAATYTAATTA	TAATTARATTA	SELEX Nitta et al.(2015) CG9876_3	0.641	0.544
CG9876 M03868_2.00	Drosophila melanogaster	TAATTRVNTAATTR	YAATTANBYAATTA	SELEX Nitta et al.(2015) CG9876_4	0.641	0.544
CG9876 M06537_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0184.1	0.641	0.544
CG9876 M06350_2.00	Drosophila melanogaster	DBTAATTR	YAATTAVH	B1H Zhu et al.(2011) CG9876_Cell_FBgn0034821	0.641	0.544
CG9876 M06351_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG9876_SOLEXA_FBgn0034821	0.641	0.544
Rax M00426_2.00	Mus musculus	NNTAATTRN	NYAATTANN	PBM Berger et al.(2008) Rax_3443	0.641	0.509
RAX M03149_2.00	Homo sapiens	NHTAATTRNN	NNYAATTADN	SELEX Jolma et al.(2013) RAX_1	0.641	0.509
RAX2 M03214_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) RAXL1_1	0.641	0.509
Rx M03840_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) Rx_1	0.641	0.509
Rx M03841_2.00	Drosophila melanogaster	NTAATBNSATTAN	NTAATSNVATTAN	SELEX Nitta et al.(2015) Rx_2	0.641	0.509
RAX M05142_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) RAX_eDBD_HT-SELEX	0.641	0.509
Rx M06520_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0202.1	0.641	0.509
Rx M06317_2.00	Drosophila melanogaster	VYTAATTR	YAATTARB	B1H Zhu et al.(2011) Rx_Cell_FBgn0020617	0.641	0.509
Rx M06318_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Rx_SOLEXA_FBgn0020617	0.641	0.509
Rax M10773_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RAX_04	0.641	0.509
RAX M05143_2.00	Homo sapiens	NTAAYRNN	NNYRTTAN	SELEX Yin et al.(2017) RAX_eDBD_Methyl-HT-SELEX_1	0.641	0.509
RAX M05144_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) RAX_eDBD_Methyl-HT-SELEX_2	0.641	0.509
ESX1 M00292_2.00	Homo sapiens	NNTAATNDN	NHNATTANN	PBM Barrera et al.(2016) ESX1_REF	0.641	0.491
ESX1 M03137_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ESX1_1	0.641	0.491
ESX1 M03138_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ESX1_2	0.641	0.491
ESX1 M05087_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ESX1_eDBD_HT-SELEX	0.641	0.491
ESX1 M05089_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ESX1_FL_HT-SELEX	0.641	0.491
ESX1 M05088_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ESX1_eDBD_Methyl-HT-SELEX	0.641	0.491
ESX1 M05090_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ESX1_FL_Methyl-HT-SELEX	0.641	0.491
ISX M00319_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_REF	0.641	0.509
ISX M03218_2.00	Homo sapiens	NTAATTARATTAN	NTAATYTAATTAN	SELEX Jolma et al.(2013) ISX_1	0.641	0.509
ISX M03219_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Jolma et al.(2013) ISX_2	0.641	0.509
ISX M03220_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) ISX_3	0.641	0.509
ISX M05304_2.00	Homo sapiens	BTAATTRG	CYAATTAV	SELEX Yin et al.(2017) ISX_eDBD_HT-SELEX	0.641	0.509
ISX M05307_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_HT-SELEX	0.641	0.509
ISX M05305_2.00	Homo sapiens	NTAATTAG	CTAATTAN	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_1	0.641	0.509
ISX M05306_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_eDBD_Methyl-HT-SELEX_2	0.641	0.509
ISX M05308_2.00	Homo sapiens	YTAATTRS	SYAATTAR	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_1	0.641	0.509
ISX M05309_2.00	Homo sapiens	HTAAYGHN	NDCRTTAD	SELEX Yin et al.(2017) ISX_FL_Methyl-HT-SELEX_2	0.641	0.509
zfh-2 M01850_2.00	Caenorhabditis elegans	NYTAATTARNN	NNYTAATTARN	PBM Weirauch et al.(2014) pTH6132	0.636	0.439
HESX1 M00306_2.00	Homo sapiens	WRATDRNN	NNYHATYW	PBM Barrera et al.(2016) HESX1_E149K	0.634	0.526
ZFHX2 M02089_2.00	Homo sapiens	NNTRATYANN	NNTRATYANN	PBM Weirauch et al.(2014) pTH5642	0.632	0.351
VSX1 M00268_2.00	Homo sapiens	NNWRAYNNN	NNNRTYWNN	PBM Barrera et al.(2016) VSX1_R166Q	0.632	0.509
Q0N4F9_NEMVE M02162_2.00	Nematostella vectensis	DTAATTAK	MTAATTAH	PBM Weirauch et al.(2014) pTH6150	0.631	0.456
Vsx2 M02130_2.00	Drosophila melanogaster	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH6195	0.630	0.491
Vsx2 M03880_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) Vsx2_1	0.630	0.491
Vsx2 M03881_2.00	Drosophila melanogaster	HRAYNVNNTRATKD	HMATYANNBNRTYD	SELEX Nitta et al.(2015) Vsx2_2	0.630	0.491
Vsx2 M06553_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Mathelier et al.(2014) MA0180.1	0.630	0.491
Vsx2 M06382_2.00	Drosophila melanogaster	KTTAATTAG	CTAATTAAM	B1H Zhu et al.(2011) CG33980_Cell_FBgn0053980	0.630	0.491
Vsx2 M06383_2.00	Drosophila melanogaster	NNTAATTRRN	NYYAATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_0_FBgn0053980	0.630	0.491
Vsx2 M06384_2.00	Drosophila melanogaster	NNTAATKDN	NHMATTANN	B1H Zhu et al.(2011) CG33980_SOLEXA_2_10_FBgn0053980	0.630	0.491
Vsx2 M06385_2.00	Drosophila melanogaster	NHTAATTR	YAATTADN	B1H Zhu et al.(2011) CG33980_SOLEXA_FBgn0053980	0.630	0.491
Vsx1 M02129_2.00	Drosophila melanogaster	VTTAATTRR	YYAATTAAB	PBM Weirauch et al.(2014) pTH5821	0.626	0.526
Vsx1 M03879_2.00	Drosophila melanogaster	NTAATTRV	BYAATTAN	SELEX Nitta et al.(2015) Vsx1_1	0.626	0.526
Vsx1 M06552_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0181.1	0.626	0.526
Vsx1 M06380_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) CG4136_Cell_FBgn0029775	0.626	0.526
Vsx1 M06381_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) CG4136_SOLEXA_FBgn0029775	0.626	0.526
CBG07641 M02063_2.00	Caenorhabditis briggsae	NBTAATTAVN	NBTAATTAVN	PBM Weirauch et al.(2014) pTH6520	0.619	0.474
ISX M00318_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_R83Q	0.609	0.491
Lbx2 M00465_2.00	Mus musculus	NHAABNRN	NYNVTTDN	PBM Berger et al.(2008) Lbx2_3869	0.604	0.456
LBX2 M03224_2.00	Homo sapiens	TAAYYRSNTYNAB	VTNRANSYRRTTA	SELEX Jolma et al.(2013) LBX2_1	0.604	0.456
LBX2 M03225_2.00	Homo sapiens	NNTAATTRVN	NBYAATTANN	SELEX Jolma et al.(2013) LBX2_2	0.604	0.456
LBX2 M05321_2.00	Homo sapiens	HTAAYRAG	CTYRTTAD	SELEX Yin et al.(2017) LBX2_eDBD_HT-SELEX_1	0.604	0.456
LBX2 M05322_2.00	Homo sapiens	NTAATTAAYKRG	CYMRTTAATTAN	SELEX Yin et al.(2017) LBX2_eDBD_HT-SELEX_2	0.604	0.456
LBX2 M05323_2.00	Homo sapiens	VYTAATTRGB	VCYAATTARB	SELEX Yin et al.(2017) LBX2_eDBD_HT-SELEX_3	0.604	0.456
LBX2 M05324_2.00	Homo sapiens	HTAAYGAG	CTCRTTAD	SELEX Yin et al.(2017) LBX2_eDBD_Methyl-HT-SELEX_1	0.604	0.456
LBX2 M05325_2.00	Homo sapiens	ATAATTAATKAG	CTMATTAATTAT	SELEX Yin et al.(2017) LBX2_eDBD_Methyl-HT-SELEX_2	0.604	0.456
LBX2 M05326_2.00	Homo sapiens	NNTAATKRDN	NHYMATTANN	SELEX Yin et al.(2017) LBX2_eDBD_Methyl-HT-SELEX_3	0.604	0.456
Lmx1a M00432_2.00	Mus musculus	NNDATKRN	NYMATHNN	PBM Berger et al.(2008) Lmx1a_2238	0.600	0.421
Lmx1b M00482_2.00	Mus musculus	NDADDRN	NYHHTHN	PBM Berger et al.(2008) Lmx1b_3433	0.600	0.421
LMX1A M03179_2.00	Homo sapiens	NTAATTAV	BTAATTAN	SELEX Jolma et al.(2013) LMX1A_1	0.600	0.421
LMX1B M03153_2.00	Homo sapiens	NTWATTRN	NYAATWAN	SELEX Jolma et al.(2013) LMX1B_1	0.600	0.421
LMX1B M03154_2.00	Homo sapiens	DTAATTRV	BYAATTAH	SELEX Jolma et al.(2013) LMX1B_2	0.600	0.421
LMX1A M05215_2.00	Homo sapiens	YTAATTAV	BTAATTAR	SELEX Yin et al.(2017) LMX1A_eDBD_HT-SELEX	0.600	0.421
LMX1B M05153_2.00	Homo sapiens	NNNBTAATTAN	NTAATTAVNNN	SELEX Yin et al.(2017) LMX1B_eDBD_HT-SELEX	0.600	0.421
LMX1B M05156_2.00	Homo sapiens	NDDTTAATTAH	DTAATTAAHHN	SELEX Yin et al.(2017) LMX1B_FL_HT-SELEX	0.600	0.421
LMX1A M05216_2.00	Homo sapiens	DTAAYGHN	NDCRTTAH	SELEX Yin et al.(2017) LMX1A_eDBD_Methyl-HT-SELEX_1	0.600	0.421
LMX1A M05217_2.00	Homo sapiens	YTAATTRN	NYAATTAR	SELEX Yin et al.(2017) LMX1A_eDBD_Methyl-HT-SELEX_2	0.600	0.421
LMX1B M05154_2.00	Homo sapiens	NNNBYAATTRN	NYAATTRVNNN	SELEX Yin et al.(2017) LMX1B_eDBD_Methyl-HT-SELEX_1	0.600	0.421
LMX1B M05155_2.00	Homo sapiens	WTAAYGAR	YTCRTTAW	SELEX Yin et al.(2017) LMX1B_eDBD_Methyl-HT-SELEX_2	0.600	0.421
LMX1B M05157_2.00	Homo sapiens	TTAACGAG	CTCGTTAA	SELEX Yin et al.(2017) LMX1B_FL_Methyl-HT-SELEX_1	0.600	0.421
LMX1B M05158_2.00	Homo sapiens	NWWTTAATTAW	WTAATTAAWWN	SELEX Yin et al.(2017) LMX1B_FL_Methyl-HT-SELEX_2	0.600	0.421
CG4328 M06538_2.00	Drosophila melanogaster	WTWATTR	YAATWAW	B1H Mathelier et al.(2014) MA0182.1	0.600	0.404
CG4328 M06352_2.00	Drosophila melanogaster	NWWWATTR	YAATWWWN	B1H Zhu et al.(2011) CG4328_Cell_FBgn0036274	0.600	0.404
CG4328 M06353_2.00	Drosophila melanogaster	YAATWANN	NNTWATTR	B1H Zhu et al.(2011) CG4328_SOLEXA_FBgn0036274	0.600	0.404
repo M03826_2.00	Drosophila melanogaster	VTTAATTARB	VYTAATTAAB	SELEX Nitta et al.(2015) repo_1	0.600	0.509
repo M03827_2.00	Drosophila melanogaster	VKYAATTRRN	NYYAATTRMB	SELEX Nitta et al.(2015) repo_2	0.600	0.509
repo M03828_2.00	Drosophila melanogaster	VBYAATTRVNNBYAATTRVB	VBYAATTRVNNBYAATTRVB	SELEX Nitta et al.(2015) repo_3	0.600	0.509
repo M06511_2.00	Drosophila melanogaster	TTAATTA	TAATTAA	B1H Mathelier et al.(2014) MA0240.1	0.600	0.509
repo M06301_2.00	Drosophila melanogaster	DTTAATTA	TAATTAAH	B1H Zhu et al.(2011) Repo_Cell_FBgn0011701	0.600	0.509
repo M06302_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Zhu et al.(2011) Repo_SOLEXA_FBgn0011701	0.600	0.509
For this family, TFs with SR scores > 0.599* will likely have a similar motif*