Eucgr.B02504 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.B02504 T228447_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.862 0.946
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.862 0.946
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.862 0.946
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.857 0.911
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.857 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B02504.1 Homeodomain 24 83

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_186054 Agaricus bisporus AGABI2DRAFT_186054 N
M378DRAFT_787408 Amanita muscaria M378DRAFT_787408 N
CERSUDRAFT_112754 Ceriporiopsis subvermispora CERSUDRAFT_112754 N
CC1G_11570 Coprinopsis cinerea CC1G_11570 N
DACRYDRAFT_105815 Dacryopinax sp DACRYDRAFT_105815 N
FOMPIDRAFT_1162733 Fomitopsis pinicola FOMPIDRAFT_1162733 N
GALMADRAFT_240800 Galerina marginata GALMADRAFT_240800 N
GYMLUDRAFT_43655 Gymnopus luxurians GYMLUDRAFT_43655 N
M413DRAFT_25333 Hebeloma cylindrosporum M413DRAFT_25333 N
JAAARDRAFT_31242 Jaapia argillacea JAAARDRAFT_31242 N
K443DRAFT_672070 Laccaria amethystina K443DRAFT_672070 N
LACBIDRAFT_305537 Laccaria bicolor LACBIDRAFT_305537 N
PAXRUDRAFT_131223 Paxillus rubicundulus PAXRUDRAFT_131223 N
fgenesh1_pg.C_scaffold_3000269 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000269 N
PHLGIDRAFT_281883 Phlebiopsis gigantea PHLGIDRAFT_281883 N
PILCRDRAFT_7448 Piloderma croceum PILCRDRAFT_7448 N
M404DRAFT_135916 Pisolithus tinctorius M404DRAFT_135916 N
PLEOSDRAFT_1113210 Pleurotus ostreatus PLEOSDRAFT_1113210 N
V565_039080 Rhizoctonia solani V565_039080 N
SCHCODRAFT_269948 Schizophyllum commune SCHCODRAFT_269948 N
SCLCIDRAFT_137855 Scleroderma citrinum SCLCIDRAFT_137855 N
SERLA73DRAFT_184665 Serpula lacrymans SERLA73DRAFT_184665 N
CY34DRAFT_799337 Suillus luteus CY34DRAFT_799337 N
BN946_scf185008.g46 Trametes cinnabarina BN946_scf185008.g46 N
J056_002103 Wallemia ichthyophaga J056_002103 N
WALSEDRAFT_62280 Wallemia sebi WALSEDRAFT_62280 N