Eucgr.F01858 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.F01858 T228474_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.777 0.653
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.551
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.602 0.408
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.602 0.408
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.602 0.408
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.602 0.408
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F01858.1 Homeodomain 364 415

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

1012 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000050069-D4 Bos grunniens ENSBTAP00000050069-D4 I 0.000
ZNF664 Bos taurus ENSBTAG00000039023 I 0.000
ZNF664 Callithrix jacchus ENSCJAG00000020528 I 0.000
ZNF664 Canis familiaris ENSCAFG00000006994 I 0.000
ENSCPOG00000014434 Cavia porcellus ENSCPOG00000014434 I 0.000
ENSCSAG00000018951 Chlorocebus sabaeus ENSCSAG00000018951 I 0.000
ZNF664 Choloepus hoffmanni ENSCHOG00000007980 I 0.000
ZNF664 Dasypus novemcinctus ENSDNOG00000049308 I 0.000
ENSDORG00000002347 Dipodomys ordii ENSDORG00000002347 I 0.000
ZNF664 Echinops telfairi ENSETEG00000002897 I 0.000
ZNF664 Erinaceus europaeus ENSEEUG00000012333 I 0.000
ZNF664 Felis catus ENSFCAG00000011064 I 0.000
ZNF664 Gorilla gorilla ENSGGOG00000011984 I 0.000
ZNF664 Homo sapiens ENSG00000179195 I 0.000
ENSSTOG00000005576 Ictidomys tridecemlineatus ENSSTOG00000005576 I 0.000
ZNF664 Loxodonta africana ENSLAFG00000004183 I 0.000
ENSP00000337320 Macaca fascicularis ENSP00000337320 I 0.000
ZNF664 Macaca mulatta ENSMMUG00000009213 I 0.000
Zfp664 Mus musculus ENSMUSG00000079215 D 0.000
Myotis_brandtii_ZNF664_10013049 Myotis brandtii Myotis_brandtii_ZNF664_10013049 I 0.000
ZNF664 Myotis lucifugus ENSMLUG00000001021 I 0.000
ENSNLEG00000002332 Nomascus leucogenys ENSNLEG00000002332 I 0.000
ZNF664 Ochotona princeps ENSOPRG00000012643 I 0.000
ZNF664 Otolemur garnettii ENSOGAG00000008743 I 0.000
ENSOARG00000004564 Ovis aries ENSOARG00000004564 I 0.000
ZNF664 Pan troglodytes ENSPTRG00000029491 I 0.000
ENSPANG00000017820 Papio anubis ENSPANG00000017820 I 0.000
ENSPPYG00000005169 Pongo abelii ENSPPYG00000005169 I 0.000
ZNF664 Pteropus vampyrus ENSPVAG00000001588 I 0.000
LOC102556092 Rattus norvegicus ENSRNOG00000021705 I 0.000
ENSSSCG00000009763 Sus scrofa ENSSSCG00000009763 I 0.000
ZNF664 Tursiops truncatus ENSTTRG00000002993 I 0.000
ZNF664 Vicugna pacos ENSVPAG00000007679 I 0.000