CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_115.10
(
Carica papaya
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
evm.TU.supercontig_115.10
T228526_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_115.10
Homeodomain
274
327
SAQKRLKKVQLETLERVYKRSKRPTNAMISSIVQVTNLPRKRVLKWFEDRRTED
Links
Other
Homeodomain
family TFs
Other
Carica papaya
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK11776.1
Cannabis sativa
PK11776.1
I
gene31621-v1.0-hybrid
Fragaria vesca
gene31621-v1.0-hybrid
N
GLYMA11G36010
Glycine max
GLYMA11G36010
N
GLYMA18G02430
Glycine max
GLYMA18G02430
N
Lus10011445.g
Linum usitatissimum
Lus10011445.g
N
Lus10035873.g
Linum usitatissimum
Lus10035873.g
N
Lus10037550.g
Linum usitatissimum
Lus10037550.g
N
cassava20419.m1
Manihot esculenta
cassava20419.m1
N
Pm002037
Prunus mume
Pm002037
I
PRUPE_ppa007578mg
Prunus persica
PRUPE_ppa007578mg
I
29908.m005962
Ricinus communis
29908.m005962
N
SapurV1A.1429s0020
Salix purpurea
SapurV1A.1429s0020
N
TCM_001212
Theobroma cacao
TCM_001212
N