gene17249-v1.0-hybrid (Fragaria vesca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 gene17249-v1.0-hybrid T228614_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.679 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna17249.1-v1.0-hybrid Homeodomain 469 525

Links

Other Homeodomain family TFs
Other Fragaria vesca TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB08968.1 Alternaria brassicicola AB08968.1 I 0.000
ARB_03451 Arthroderma benhamiae ARB_03451 I 0.000
MCYG_03346 Arthroderma otae MCYG_03346 I 0.000
e_gw1.00771.352.1 Aspergillus carbonarius e_gw1.00771.352.1 I 0.000
COCC4DRAFT_125759 Bipolaris maydis COCC4DRAFT_125759 I 0.000
COCMIDRAFT_108054 Bipolaris oryzae COCMIDRAFT_108054 I 0.000
COCSADRAFT_86485 Bipolaris sorokiniana COCSADRAFT_86485 I 0.000
COCVIDRAFT_30018 Bipolaris victoriae COCVIDRAFT_30018 I 0.000
COCVIDRAFT_20419 Bipolaris victoriae COCVIDRAFT_20419 I 0.000
COCCADRAFT_29461 Bipolaris zeicola COCCADRAFT_29461 I 0.000
CaO19.10704 Candida albicans CaO19.10704 I 0.000
CaO19.3193 Candida albicans CaO19.3193 I 0.000
CD36_51520 Candida dubliniensis CD36_51520 I 0.000
CAGL0M10087g Candida glabrata CAGL0M10087g I 0.000
CAGL0K02585g Candida glabrata CAGL0K02585g I 0.000
PGUG_03388 Candida guilliermondii PGUG_03388 I 0.000
G210_3388 Candida maltosa G210_3388 I 0.000
CORT_0E05690 Candida orthopsilosis CORT_0E05690 I 0.000
CPAG_03328 Candida parapsilosis CPAG_03328 I 0.000
CANTEDRAFT_114901 Candida tenuis CANTEDRAFT_114901 I 0.000
CTRG_05304 Candida tropicalis CTRG_05304 I 0.000
CIMG_01816 Coccidioides immitis CIMG_01816 I 0.000
CPC735_046790 Coccidioides posadasii CPC735_046790 I 0.000
estExt_Genewise1Plus.C_40021 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_40021 I 0.000
DEHA2E11616g Debaryomyces hansenii DEHA2E11616g I 0.000
Ecym_2430 Eremothecium cymbalariae Ecym_2430 I 0.000
KNAG_0C05680 Kazachstania naganishii KNAG_0C05680 I 0.000
KLTH0D05918g Kluyveromyces thermotolerans KLTH0D05918g I 0.000
SAKL0E02420g Lachancea kluyveri SAKL0E02420g I 0.000
KLTH0D05918g Lachancea thermotolerans KLTH0D05918g I 0.000
LEMA_P113690.1 Leptosphaeria maculans LEMA_P113690.1 I 0.000
PGUG_03388 Meyerozyma guilliermondii PGUG_03388 I 0.000
MCYG_03346 Microsporum canis MCYG_03346 I 0.000
MGYG_00508 Microsporum gypseum MGYG_00508 I 0.000
fgeneshMC_pg.2_#_504 Mucor circinelloides fgeneshMC_pg.2_#_504 I 0.000
NCAS_0A12530 Naumovozyma castellii NCAS_0A12530 I 0.000
UCRNP2_115 Neofusicoccum parvum UCRNP2_115 I 0.000
OIDMADRAFT_110220 Oidiodendron maius OIDMADRAFT_110220 I 0.000
PAAG_05122 Paracoccidioides sp lutzii PAAG_05122 I 0.000
SNOG_00166 Phaeosphaeria nodorum SNOG_00166 I 0.000
estExt_fgeneshPB_pg.C_10616 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_10616 I 0.000
PTT_08596 Pyrenophora teres PTT_08596 I 0.000
PTRG_07150 Pyrenophora triticirepentis PTRG_07150 I 0.000
GLOINDRAFT_44500 Rhizophagus irregularis GLOINDRAFT_44500 I 0.000
SU7_1398 Saccharomyces arboricola SU7_1398 I 0.000
23273_YHL009C Saccharomyces bayanus 23273_YHL009C I 0.000
Scas_Contig673.3 Saccharomyces castellii Scas_Contig673.3 I 0.000
SKUD_203408 Saccharomyces kudriavzevii SKUD_203408 I 0.000
9588_YHL009C Saccharomyces mikatae 9588_YHL009C I 0.000
10438_YHL009C Saccharomyces paradoxus 10438_YHL009C I 0.000
SETTUDRAFT_111603 Setosphaeria turcica SETTUDRAFT_111603 I 0.000
SNOG_00166 Stagonospora nodorum SNOG_00166 I 0.000
TBLA_0I00300 Tetrapisispora blattae TBLA_0I00300 I 0.000
TEQG_00858 Trichophyton equinum TEQG_00858 I 0.000
H101_05542 Trichophyton interdigitale H101_05542 I 0.000
H102_08445 Trichophyton rubrum H102_08445 I 0.000
TESG_06189 Trichophyton tonsurans TESG_06189 I 0.000
TRV_06106 Trichophyton verrucosum TRV_06106 I 0.000
UREG_05510 Uncinocarpus reesii UREG_05510 I 0.000
BN7_4345 Wickerhamomyces ciferrii BN7_4345 I 0.000