gene30482-v1.0-hybrid (Fragaria vesca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 gene30482-v1.0-hybrid T228651_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna30482.1-v1.0-hybrid Homeodomain 174 228

Links

Other Homeodomain family TFs
Other Fragaria vesca TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000012300 Astyanax mexicanus ENSAMXG00000012300 N
ENSAMXG00000010483 Astyanax mexicanus ENSAMXG00000010483 N
usf1 Danio rerio ENSDARG00000041689 N
ENSGMOG00000013274 Gadus morhua ENSGMOG00000013274 I
ENSGMOG00000010933 Gadus morhua ENSGMOG00000010933 N
ENSGMOG00000009783 Gadus morhua ENSGMOG00000009783 I
usf2 Gasterosteus aculeatus ENSGACG00000002481 N
usf1 Gasterosteus aculeatus ENSGACG00000005115 I
USF2 Gasterosteus aculeatus ENSGACG00000012475 I
USF2 Gorilla gorilla ENSGGOG00000000767 N
GYMLUDRAFT_839581 Gymnopus luxurians GYMLUDRAFT_839581 N
ARNTL Homo sapiens ENSG00000133794 D
USF2 Homo sapiens ENSG00000105698 D
ENSLACG00000001157 Latimeria chalumnae ENSLACG00000001157 I
ENSLOCG00000000641 Lepisosteus oculatus ENSLOCG00000000641 I
augustus_masked-nMf.1.1.scaf28485-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf28485-processed-gene-0.0 N
Mlx Mus musculus ENSMUSG00000017801 D
ENSONIG00000013775 Oreochromis niloticus ENSONIG00000013775 N
usf1 Oryzias latipes ENSORLG00000015402 I
ENSPMAG00000009581 Petromyzon marinus ENSPMAG00000009581 N
ENSPFOG00000005160 Poecilia formosa ENSPFOG00000005160 I
ENSPFOG00000017027 Poecilia formosa ENSPFOG00000017027 I
L889_g9731 Steinernema feltiae L889_g9731 N
usf1 Takifugu rubripes ENSTRUG00000005343 I
usf1 Tetraodon nigroviridis ENSTNIG00000014361 I
XP_002938246 Xenopus tropicalis XP_002938246 N
ENSXMAG00000005137 Xiphophorus maculatus ENSXMAG00000005137 I
ENSXMAG00000006484 Xiphophorus maculatus ENSXMAG00000006484 I