Gorai.010G007800 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.010G007800 T228787_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.810 0.755
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.626 0.571
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.602 0.429
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.602 0.429
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.602 0.429
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.602 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G007800.1 Homeodomain 290 341

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

1001 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_019110 Acremonium chrysogenum ACRE_019110 N 0.000
BBA_01981 Beauveria bassiana BBA_01981 N 0.000
COCC4DRAFT_18753 Bipolaris maydis COCC4DRAFT_18753 N 0.000
COCMIDRAFT_38152 Bipolaris oryzae COCMIDRAFT_38152 N 0.000
COCSADRAFT_212000 Bipolaris sorokiniana COCSADRAFT_212000 N 0.000
COCVIDRAFT_32531 Bipolaris victoriae COCVIDRAFT_32531 N 0.000
COCCADRAFT_37755 Bipolaris zeicola COCCADRAFT_37755 N 0.000
Bcin11g03650 Botrytis cinerea Bcin11g03650 N 0.000
A1O3_09901 Capronia epimyces A1O3_09901 N 0.000
PV04_06869 Capronia semiimmersa PV04_06869 N 0.000
CHGG_04979 Chaetomium globosum CHGG_04979 N 0.000
Z519_08018 Cladophialophora bantiana Z519_08018 N 0.000
G647_06073 Cladophialophora carrionii G647_06073 N 0.000
PV07_03011 Cladophialophora immunda PV07_03011 N 0.000
A1O5_05129 Cladophialophora psammophila A1O5_05129 N 0.000
CPUR_04455 Claviceps purpurea CPUR_04455 N 0.000
estExt_fgenesh1_pg.C_20315 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_20315 N 0.000
GLRG_11037 Colletotrichum graminicola GLRG_11037 N 0.000
CH063_02883 Colletotrichum higginsianum CH063_02883 N 0.000
Cob_07468 Colletotrichum orbiculare Cob_07468 N 0.000
CSUB01_03140 Colletotrichum sublineola CSUB01_03140 N 0.000
W97_00259 Coniosporium apollinis W97_00259 N 0.000
estExt_Genewise1Plus.C_30186 Cryphonectria parasitica estExt_Genewise1Plus.C_30186 N 0.000
HMPREF1120_04205 Exophiala dermatitidis HMPREF1120_04205 N 0.000
PV11_07148 Exophiala sideris PV11_07148 N 0.000
PV05_08217 Exophiala xenobiotica PV05_08217 N 0.000
Z517_05634 Fonsecaea pedrosoi Z517_05634 N 0.000
FFUJ_01093 Fusarium fujikuroi FFUJ_01093 N 0.000
FGRRES_00574 Fusarium graminearum FGRRES_00574 N 0.000
FPSE_03135 Fusarium pseudograminearum FPSE_03135 N 0.000
GGTG_05714 Gaeumannomyces graminis GGTG_05714 N 0.000
CMQ_7236 Grosmannia clavigera CMQ_7236 N 0.000
LEMA_P037470.1 Leptosphaeria maculans LEMA_P037470.1 N 0.000
MGG_10528 Magnaporthe oryzae MGG_10528 N 0.000
MBM_09637 Marssonina brunnea MBM_09637 N 0.000
MAC_03038 Metarhizium acridum MAC_03038 N 0.000
MAM_01897 Metarhizium album MAM_01897 N 0.000
MANI_001311 Metarhizium anisopliae MANI_001311 N 0.000
MBR_03402 Metarhizium brunneum MBR_03402 N 0.000
MGU_02792 Metarhizium guizhouense MGU_02792 N 0.000
MAJ_00705 Metarhizium majus MAJ_00705 N 0.000
X797_003963 Metarhizium robertsii X797_003963 N 0.000
MYCTH_2299532 Myceliophthora thermophila MYCTH_2299532 N 0.000
OIDMADRAFT_53431 Oidiodendron maius OIDMADRAFT_53431 N 0.000
F503_05665 Ophiostoma piceae uamh F503_05665 N 0.000
PFICI_01056 Pestalotiopsis fici PFICI_01056 N 0.000
SNOG_08898 Phaeosphaeria nodorum SNOG_08898 N 0.000
PTT_13565 Pyrenophora teres PTT_13565 N 0.000
Z518_05834 Rhinocladiella mackenziei Z518_05834 N 0.000
SETTUDRAFT_66917 Setosphaeria turcica SETTUDRAFT_66917 N 0.000
SPBR_02702 Sporothrix brasiliensis SPBR_02702 N 0.000
HMPREF1624_02645 Sporothrix schenckii HMPREF1624_02645 N 0.000
S40285_00671 Stachybotrys chlorohalonata S40285_00671 N 0.000
THITE_2043828 Thielavia terrestris THITE_2043828 N 0.000
VHEMI06241 Torrubiella hemipterigena VHEMI06241 N 0.000
UV8b_4792 Ustilaginoidea virens UV8b_4792 N 0.000
PV09_06680 Verruconis gallopava PV09_06680 N 0.000
VDAG_03482 Verticillium dahliae VDAG_03482 N 0.000