Gorai.013G254100 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.013G254100 T228818_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.628 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G254100.1 Homeodomain 20 76
Gorai.013G254100.2 Homeodomain 20 76
Gorai.013G254100.3 Homeodomain 20 76
Gorai.013G254100.4 Homeodomain 20 76
Gorai.013G254100.5 Homeodomain 1 29

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zscan10 Mus musculus ENSMUSG00000023902 D 0.000