CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000874562
(
Malus domestica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
MDP0000874562
T229123_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000874562
Homeodomain
153
190
PKPRWNPKPEQIRILEAIFNFGVVNPPRDEIRKIRAQM
Links
Other
Homeodomain
family TFs
Other
Malus domestica
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAM003654
Anopheles maculatus
AMAM003654
I
0.612
AMIN005749
Anopheles minimus
AMIN005749
I
0.613
Bra020321
Brassica rapa
Bra020321
N
0.693
Bra034855
Brassica rapa
Bra034855
N
0.656
Bra002576
Brassica rapa
Bra002576
N
0.701
PK01458.1
Cannabis sativa
PK01458.1
N
0.694
Ca_12504
Cicer arietinum
Ca_12504
N
0.668
Cucsa.213810
Cucumis sativus
Cucsa.213810
N
0.642
ENSMEUG00000001401
Macropus eugenii
ENSMEUG00000001401
N
0.600
MDP0000854437
Malus domestica
MDP0000854437
N
0.867
MDP0000250248
Malus domestica
MDP0000250248
N
0.647
MCINX001506
Melitaea cinxia
MCINX001506
I
0.615
ENSMICG00000002512
Microcebus murinus
ENSMICG00000002512
I
0.612
OBART08G07280
Oryza barthii
OBART08G07280
N
0.697
OB05G33420
Oryza brachyantha
OB05G33420
N
0.813
OLONG_015615
Oryza longistaminata
OLONG_015615
N
0.639
OMERI03G30000
Oryza meridionalis
OMERI03G30000
N
0.782
ONIVA03G16810
Oryza nivara
ONIVA03G16810
N
0.709
ORUFI07G17770
Oryza rufipogon
ORUFI07G17770
N
0.675
PEQ_0000511901
Parascaris equorum
PEQ_0000511901
I
0.612
ENSPSIG00000008536
Pelodiscus sinensis
ENSPSIG00000008536
I
0.621
30202.m000250
Ricinus communis
30202.m000250
I
0.677
O9G_004201
Rozella allomycis
O9G_004201
N
0.607
Traes_1AL_489411063
Triticum aestivum
Traes_1AL_489411063
N
0.719
TRIUR3_03990
Triticum urartu
TRIUR3_03990
N
0.684
GRMZM2G419252
Zea mays
GRMZM2G419252
N
0.802