LCUP015129 (Lucilia cuprina)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 LCUP015129 T229952_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.854 0.962
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.854 0.962
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.854 0.962
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.854 0.962
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.854 0.962
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.848 0.811
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.848 0.811
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.848 0.811
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.848 0.811
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.827 0.792
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.827 0.792
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.827 0.792
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.827 0.792
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.827 0.792
so
M02117_2.00 		Drosophila melanogaster
NDATMYNNN
NNNRKATHN		 PBM
Weirauch et al.(2014)
pTH5690 		0.708 0.717
so
M03800_2.00 		Drosophila melanogaster
NYGATAYB
VRTATCRN		 SELEX
Nitta et al.(2015)
so_1 		0.708 0.717
so
M03801_2.00 		Drosophila melanogaster
YKATAYNNNYGATAY
RTATCRNNNRTATMR		 SELEX
Nitta et al.(2015)
so_2 		0.708 0.717
so
M03802_2.00 		Drosophila melanogaster
YGATACGTATCR
YGATACGTATCR		 SELEX
Nitta et al.(2015)
so_3 		0.708 0.717
so
M03803_2.00 		Drosophila melanogaster
RTATCRYGATAC
GTATCRYGATAY		 SELEX
Nitta et al.(2015)
so_4 		0.708 0.717
so
M06497_2.00 		Drosophila melanogaster
TGATAC
GTATCA		 B1H
Mathelier et al.(2014)
MA0246.1 		0.708 0.717
so
M06268_2.00 		Drosophila melanogaster
NRTGATA
TATCAYN		 B1H
Zhu et al.(2011)
So_Cell_FBgn0003460 		0.708 0.717
so
M06269_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
So_SOLEXA_FBgn0003460 		0.708 0.717
Six2
M00425_2.00 		Mus musculus
NNAYMYNN
NNRKRTNN		 PBM
Berger et al.(2008)
Six2_2307 		0.708 0.698
Six1
M00512_2.00 		Mus musculus
NNDATMYNNN
NNNRKATHNN		 PBM
Berger et al.(2008)
Six1_0935 		0.708 0.698
SIX1
M05094_2.00 		Homo sapiens
NNYGATACVB
VBGTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_HT-SELEX 		0.708 0.698
SIX1
M05096_2.00 		Homo sapiens
NNYGATAYVB
VBRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_HT-SELEX 		0.708 0.698
SIX2
M05285_2.00 		Homo sapiens
NNYGATACSB
VSGTATCRNN		 SELEX
Yin et al.(2017)
SIX2_eDBD_HT-SELEX 		0.708 0.698
SIX2
M05287_2.00 		Homo sapiens
NSGTRWCRYN
NRYGWYACSN		 SELEX
Yin et al.(2017)
SIX2_FL_HT-SELEX 		0.708 0.698
SIX1
M08130_2.00 		Homo sapiens
GWAACCTGANM
KNTCAGGTTWC		 ChIP-seq
Mathelier et al.(2014)
MA1118.1 		0.708 0.698
SIX2
M08133_2.00 		Homo sapiens
NNNTGWAACCTGAKMH
DKMTCAGGTTWCANNN		 ChIP-seq
Mathelier et al.(2014)
MA1119.1 		0.708 0.698
SIX1
M09142_2.00 		Homo sapiens
DGWAAYHTGABMYN
NRKVTCADRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX1_HUMAN.H11MO.0.A 		0.708 0.698
SIX2
M09157_2.00 		Homo sapiens
DGWAAYHHGABMH
DKVTCDDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_HUMAN.H11MO.0.A 		0.708 0.698
Six2
M09185_2.00 		Mus musculus
DGWAAYHYRABMYB
VRKVTYRDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_MOUSE.H11MO.0.A 		0.708 0.698
Six1
M09579_2.00 		Mus musculus
GWAAYHTGABMH
DKVTCADRTTWC		 Misc
Heinz et al.(2010)
Myoblast-Six1_GSE20150 		0.708 0.698
SIX1
M10684_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3_01 		0.708 0.698
SIX1
M10685_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3 		0.708 0.698
SIX1
M05095_2.00 		Homo sapiens
NNYGATABNB
VNVTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_Methyl-HT-SELEX 		0.708 0.698
SIX1
M05097_2.00 		Homo sapiens
NNYGATAYSB
VSRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_Methyl-HT-SELEX 		0.708 0.698
SIX2
M05286_2.00 		Homo sapiens
NBRTATCRNN
NNYGATAYVN		 SELEX
Yin et al.(2017)
SIX2_eDBD_Methyl-HT-SELEX 		0.708 0.698
SIX2
M05288_2.00 		Homo sapiens
VBRTAWCRNN
NNYGWTAYVB		 SELEX
Yin et al.(2017)
SIX2_FL_Methyl-HT-SELEX 		0.708 0.698
ceh-34
M00672_2.00 		Caenorhabditis elegans
NNNRDAWNNN
NNNWTHYNNN		 PBM
Narasimhan et al.(2015)
pTH9708 		0.633 0.547
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP015129-PA Homeodomain 317 369

Links

Other Homeodomain family TFs
Other Lucilia cuprina TFs

541 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_010220 Acremonium chrysogenum ACRE_010220 I
AMAG_13560 Allomyces macrogynus AMAG_13560 I
AMAG_13812 Allomyces macrogynus AMAG_13812 I
M378DRAFT_52467 Amanita muscaria M378DRAFT_52467 I
ARB_03649 Arthroderma benhamiae ARB_03649 I
MCYG_07480 Arthroderma otae MCYG_07480 I
fgenesh1_pg.00815_#_160 Aspergillus carbonarius fgenesh1_pg.00815_#_160 I
ACLA_072760 Aspergillus clavatus CADACLAG00007067 I
CADAFLAG00007032 Aspergillus flavus CADAFLAG00007032 I
AFUA_2G14720 Aspergillus fumigatus CADAFUAG00004810 I
ANIA_07545 Aspergillus nidulans CADANIAG00000651 I
CADANGAG00012044 Aspergillus niger CADANGAG00012044 I
CADAORAG00008808 Aspergillus oryzae CADAORAG00008808 I
EURHEDRAFT_381770 Aspergillus ruber EURHEDRAFT_381770 I
ATEG_07814 Aspergillus terreus CADATEAG00001961 I
M437DRAFT_74372 Aureobasidium melanogenum M437DRAFT_74372 I
M438DRAFT_358724 Aureobasidium pullulans M438DRAFT_358724 I
AUEXF2481DRAFT_28704 Aureobasidium subglaciale AUEXF2481DRAFT_28704 I
BAUCODRAFT_76416 Baudoinia compniacensis BAUCODRAFT_76416 I
BBA_01157 Beauveria bassiana BBA_01157 I
BGHDH14_bgh02253 Blumeria graminis BGHDH14_bgh02253 I
BOTBODRAFT_182611 Botryobasidium botryosum BOTBODRAFT_182611 I
Bcin02g03320 Botrytis cinerea Bcin02g03320 I
PVAR5_8453 Byssochlamys spectabilis PVAR5_8453 I
A1O1_05495 Capronia coronata A1O1_05495 I
A1O3_09102 Capronia epimyces A1O3_09102 I
PV04_07209 Capronia semiimmersa PV04_07209 I
CERSUDRAFT_114103 Ceriporiopsis subvermispora CERSUDRAFT_114103 I
CHGG_05974 Chaetomium globosum CHGG_05974 I
CTHT_0003560 Chaetomium thermophilum CTHT_0003560 I
Z519_07395 Cladophialophora bantiana Z519_07395 I
G647_03321 Cladophialophora carrionii G647_03321 I
PV07_10918 Cladophialophora immunda PV07_10918 I
A1O5_02864 Cladophialophora psammophila A1O5_02864 I
A1O7_06785 Cladophialophora yegresii A1O7_06785 I
CPUR_08669 Claviceps purpurea CPUR_08669 I
CIMG_12689 Coccidioides immitis CIMG_12689 I
CPC735_040200 Coccidioides posadasii CPC735_040200 I
CFIO01_03727 Colletotrichum fioriniae CFIO01_03727 I
CGGC5_14765 Colletotrichum gloeosporioides CGGC5_14765 I
GLRG_01314 Colletotrichum graminicola GLRG_01314 I
CH063_08450 Colletotrichum higginsianum CH063_08450 I
Cob_12224 Colletotrichum orbiculare Cob_12224 I
CSUB01_09867 Colletotrichum sublineola CSUB01_09867 I
W97_01249 Coniosporium apollinis W97_01249 I
CC1G_07415 Coprinopsis cinerea CC1G_07415 I
CCM_02243 Cordyceps militaris CCM_02243 I
estExt_Genewise1Plus.C_140165 Cryphonectria parasitica estExt_Genewise1Plus.C_140165 I
L804_00322 Cryptococcus gattii L804_00322 I
CND03290 Cryptococcus neoformans CND03290 I
HMPREF1541_08131 Cyphellophora europaea HMPREF1541_08131 I
DACRYDRAFT_48176 Dacryopinax sp DACRYDRAFT_48176 I
DOTSEDRAFT_68866 Dothistroma septosporum DOTSEDRAFT_68866 I
EPUS_00857 Endocarpon pusillum EPUS_00857 I
A1O9_01381 Exophiala aquamarina A1O9_01381 I
HMPREF1120_07714 Exophiala dermatitidis HMPREF1120_07714 I
PV10_06645 Exophiala mesophila PV10_06645 I
PV06_05449 Exophiala oligosperma PV06_05449 I
PV11_09254 Exophiala sideris PV11_09254 I
PV08_01898 Exophiala spinifera PV08_01898 I
PV05_09594 Exophiala xenobiotica PV05_09594 I
FIBRA_08626 Fibroporia radiculosa FIBRA_08626 I
FOMPIDRAFT_1123646 Fomitopsis pinicola FOMPIDRAFT_1123646 I
Z517_09964 Fonsecaea pedrosoi Z517_09964 I
FFUJ_00859 Fusarium fujikuroi FFUJ_00859 I
FGRRES_00352 Fusarium graminearum FGRRES_00352 I
FOXG_00707 Fusarium oxysporum FOXG_00707 I
FPSE_00010 Fusarium pseudograminearum FPSE_00010 I
NechaG98863 Fusarium solani NechaG98863 I
FVEG_00807 Fusarium verticillioides FVEG_00807 I
GGTG_12878 Gaeumannomyces graminis GGTG_12878 I
GALMADRAFT_123329 Galerina marginata GALMADRAFT_123329 I
GLOTRDRAFT_21409 Gloeophyllum trabeum GLOTRDRAFT_21409 I
CMQ_1414 Grosmannia clavigera CMQ_1414 I
M413DRAFT_24434 Hebeloma cylindrosporum M413DRAFT_24434 I
HETIRDRAFT_248206 Heterobasidion irregulare HETIRDRAFT_248206 I
JAAARDRAFT_97747 Jaapia argillacea JAAARDRAFT_97747 I
PAS_chr3_0766 Komagataella pastoris PAS_chr3_0766 I
KUCA_T00003294001 Kuraishia capsulata KUCA_T00003294001 I
K443DRAFT_676702 Laccaria amethystina K443DRAFT_676702 I
LELG_00868 Lodderomyces elongisporus LELG_00868 I
MPH_13782 Macrophomina phaseolina MPH_13782 I
MGG_00354 Magnaporthe oryzae MGG_00354 I
MAPG_00591 Magnaporthe poae MAPG_00591 I
EDP44549.1 Malassezia globosa EDP44549.1 I
MSY001_2604 Malassezia sympodialis MSY001_2604 I
MBM_02278 Marssonina brunnea MBM_02278 I
MAC_08141 Metarhizium acridum MAC_08141 I
MAM_05750 Metarhizium album MAM_05750 I
MANI_001834 Metarhizium anisopliae MANI_001834 I
MBR_03191 Metarhizium brunneum MBR_03191 I
MGU_03004 Metarhizium guizhouense MGU_03004 I
MAJ_00916 Metarhizium majus MAJ_00916 I
X797_004191 Metarhizium robertsii X797_004191 I
MVLG_01455 Microbotryum violaceum MVLG_01455 I
DI09_24p280 Microsporidia sp DI09_24p280 N
MCYG_07480 Microsporum canis MCYG_07480 I
MGYG_05253 Microsporum gypseum MGYG_05253 I
Moror_8992 Moniliophthora roreri Moror_8992 I
fgeneshMC_pg.10_#_374 Mucor circinelloides fgeneshMC_pg.10_#_374 I
fgeneshMC_pg.11_#_166 Mucor circinelloides fgeneshMC_pg.11_#_166 I
MYCTH_2297059 Myceliophthora thermophila MYCTH_2297059 I
estExt_fgenesh1_pg.C_10706 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10706 I
fgenesh1_pm.C_chr_1000514 Mycosphaerella graminicola fgenesh1_pm.C_chr_1000514 I
NCAS_0E00300 Naumovozyma castellii NCAS_0E00300 I
estExt_fgenesh1_pg.C_sca_1_chr1_3_00639 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00639 I
UCRNP2_3187 Neofusicoccum parvum UCRNP2_3187 I
NFIA_089950 Neosartorya fischeri CADNFIAG00007039 I
NCU03033 Neurospora crassa NCU03033 I
estExt_fgenesh3_kg.C_40179 Neurospora discreta estExt_fgenesh3_kg.C_40179 I
NEUTE1DRAFT_126747 Neurospora tetrasperma NEUTE1DRAFT_126747 I
HPODL_04703 Ogataea parapolymorpha HPODL_04703 I
OIDMADRAFT_64370 Oidiodendron maius OIDMADRAFT_64370 I
F503_06796 Ophiostoma piceae uamh F503_06796 I
PAXRUDRAFT_147875 Paxillus rubicundulus PAXRUDRAFT_147875 I
Pc12g01590 Penicillium chrysogenum Pc12g01590 I
PDIP_02950 Penicillium digitatum PDIP_02950 I
PEX1_081380 Penicillium expansum PEX1_081380 I
PITC_020830 Penicillium italicum PITC_020830 I
PMAA_100650 Penicillium marneffei PMAA_100650 I
PDE_06383 Penicillium oxalicum PDE_06383 I
PCH_Pc12g01590 Penicillium rubens PCH_Pc12g01590 I
U727_00431281391 Penicillium solitum U727_00431281391 I
PFICI_01568 Pestalotiopsis fici PFICI_01568 I
PHACADRAFT_54766 Phanerochaete carnosa PHACADRAFT_54766 I
gwh2.6.574.1 Phanerochaete chrysosporium gwh2.6.574.1 I
PHLGIDRAFT_43379 Phlebiopsis gigantea PHLGIDRAFT_43379 I
estExt_fgeneshPB_pg.C_250119 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_250119 I
fgeneshPB_pg.4__282 Phycomyces blakesleeanus fgeneshPB_pg.4__282 I
XP_002492996.1 Pichia pastoris XP_002492996.1 I
PILCRDRAFT_824094 Piloderma croceum PILCRDRAFT_824094 I
PIIN_00087 Piriformospora indica PIIN_00087 I
PISMIDRAFT_40699 Pisolithus microcarpus PISMIDRAFT_40699 I
M404DRAFT_68462 Pisolithus tinctorius M404DRAFT_68462 I
PLEOSDRAFT_1027012 Pleurotus ostreatus PLEOSDRAFT_1027012 I
PODANS_1_17860 Podospora anserina PODANS_1_17860 I
POSPLDRAFT_42451 Postia placenta POSPLDRAFT_42451 I
GMDG_04517 Pseudogymnoascus destructans GMDG_04517 I
V499_07378 Pseudogymnoascus pannorum V499_07378 I
PaG_02568 Pseudozyma aphidis PaG_02568 N
PSEUBRA_SCAF2g02687 Pseudozyma brasiliensis PSEUBRA_SCAF2g02687 N
PFL1_05889 Pseudozyma flocculosa PFL1_05889 I
PHSY_003968 Pseudozyma hubeiensis PHSY_003968 N
Z518_09077 Rhinocladiella mackenziei Z518_09077 I
V565_064680 Rhizoctonia solani V565_064680 I
GLOINDRAFT_349601 Rhizophagus irregularis GLOINDRAFT_349601 I
RO3G_00980 Rhizopus oryzae RO3G_00980 I
RO3G_16178 Rhizopus oryzae RO3G_16178 I
RHTO_00634 Rhodosporidium toruloides RHTO_00634 I
RTG_01693 Rhodotorula glutinis RTG_01693 I
O9G_001320 Rozella allomycis O9G_001320 I
Scas_Contig712.15 Saccharomyces castellii Scas_Contig712.15 I
SCHCODRAFT_110229 Schizophyllum commune SCHCODRAFT_110229 I
SPOG_04316 Schizosaccharomyces cryophilus SPOG_04316 I
SJAG_00698 Schizosaccharomyces japonicus SJAG_00698 I
SOCG_03424 Schizosaccharomyces octosporus SOCG_03424 I
php2 Schizosaccharomyces pombe SPBC725.11c I
SCLCIDRAFT_62922 Scleroderma citrinum SCLCIDRAFT_62922 I
SBOR_3412 Sclerotinia borealis SBOR_3412 I
SS1G_01725 Sclerotinia sclerotiorum SS1G_01725 I
M408DRAFT_66182 Serendipita vermifera M408DRAFT_66182 I
SERLA73DRAFT_72938 Serpula lacrymans SERLA73DRAFT_72938 I
SMAC_00418 Sordaria macrospora SMAC_00418 I
SEPMUDRAFT_121871 Sphaerulina musiva SEPMUDRAFT_121871 I
SPPG_06102 Spizellomyces punctatus SPPG_06102 I
sr12660 Sporisorium reilianum sr12660 N
estExt_fgenesh1_pg.C_120063 Sporobolomyces roseus estExt_fgenesh1_pg.C_120063 I
SPBR_07722 Sporothrix brasiliensis SPBR_07722 I
HMPREF1624_07645 Sporothrix schenckii HMPREF1624_07645 I
S40288_04573 Stachybotrys chartarum S40288_04573 I
S40285_00742 Stachybotrys chlorohalonata S40285_00742 I
CY34DRAFT_54046 Suillus luteus CY34DRAFT_54046 I
PMAA_100650 Talaromyces marneffei PMAA_100650 I
TSTA_057980 Talaromyces stipitatus TSTA_057980 I
THITE_2112524 Thielavia terrestris THITE_2112524 I
K437DRAFT_221438 Tilletiaria anomala K437DRAFT_221438 N
UCRPA7_4038 Togninia minima UCRPA7_4038 I
VHEMI02644 Torrubiella hemipterigena VHEMI02644 I
BN946_scf184796.g4 Trametes cinnabarina BN946_scf184796.g4 I
fgeneshTM_pg.1_#_1734 Tremella mesenterica fgeneshTM_pg.1_#_1734 I
TRIATDRAFT_259021 Trichoderma atroviride TRIATDRAFT_259021 I
TRIREDRAFT_124286 Trichoderma reesei TRIREDRAFT_124286 I
TRIVIDRAFT_175433 Trichoderma virens TRIVIDRAFT_175433 I
H101_06169 Trichophyton interdigitale H101_06169 I
H102_06780 Trichophyton rubrum H102_06780 I
H105_06820 Trichophyton soudanense H105_06820 I
TRV_01971 Trichophyton verrucosum TRV_01971 I
A1Q1_02234 Trichosporon asahii A1Q1_02234 I
M407DRAFT_54328 Tulasnella calospora M407DRAFT_54328 I
UREG_01379 Uncinocarpus reesii UREG_01379 I
UV8b_4419 Ustilaginoidea virens UV8b_4419 I
UM01597 Ustilago maydis UM01597 N
VDBG_05896 Verticillium albo atrum VDBG_05896 I
VDBG_05896 Verticillium alfalfae VDBG_05896 I
J056_003714 Wallemia ichthyophaga J056_003714 I
WALSEDRAFT_57633 Wallemia sebi WALSEDRAFT_57633 I
YALI0_F23111g Yarrowia lipolytica YALI0_F23111g I
Mycgr3G83804 Zymoseptoria tritici Mycgr3G83804 I