CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

8695_YGL096W *(Saccharomyces paradoxus)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	8695_YGL096W	T230793_2.00	Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TOS8 M02192_2.00	Saccharomyces cerevisiae	NNNTKACGTMW	WKACGTMANNN	PBM Weirauch et al.(2014) pTH5696	0.867	1.000
TOS8 M00057_2.00	Saccharomyces cerevisiae	NNNCRYGNNN	NNNCRYGNNN	PBM Badis et al.(2008) TOS8_2100	0.867	1.000
TOS8 M07486_2.00	Saccharomyces cerevisiae	NWTGACAB	VTGTCAWN	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0408.1	0.867	1.000
TOS8 M08574_2.00	Saccharomyces cerevisiae	NWTGACAB	VTGTCAWN	Misc DeBoer et al.(2011) YGL096W_494	0.867	1.000
CUP9 M00059_2.00	Saccharomyces cerevisiae	TGACABHW	WDVTGTCA	PBM Badis et al.(2008) CUP9_4508	0.804	0.800
CUP9 M01553_2.00	Saccharomyces cerevisiae	NWGACAYWWH	DWWRTGTCWN	PBM Zhu et al.(2009) Cup9	0.804	0.800
CUP9 M07488_2.00	Saccharomyces cerevisiae	TGACAYAWW	WWTRTGTCA	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0288.1	0.804	0.800
CUP9 M08576_2.00	Saccharomyces cerevisiae	TGACAYAWW	WWTRTGTCA	Misc DeBoer et al.(2011) YPL177C_480	0.804	0.800
CAGL0H02959g M02060_2.00	Candida glabrata	NDTDACRBNN	NNVYGTHAHN	PBM Weirauch et al.(2014) pTH6455	0.640	0.745
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
8695_YGL096W	Homeodomain	195	252	HGKRSNLPKATVSILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINARRRK

Links
Other Homeodomain family TFs
Other *Saccharomyces paradoxus* TFs

55 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
OBART04G18910	Oryza barthii	OBART04G18910	I
ORGLA04G0160200	Oryza glaberrima	ORGLA04G0160200	I
OGLUM01G18360	Oryza glumaepatula	OGLUM01G18360	I
ARF10	Oryza indica	BGIOSGA016767	I
OMERI04G15770	Oryza meridionalis	OMERI04G15770	I
ONIVA06G31350	Oryza nivara	ONIVA06G31350	I
OS04G0519700	Oryza sativa	OS04G0519700	I