CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc01814
(
Meloidogyne incognita
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Minc01814
T230921_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEMVEDRAFT_v1g81309
M02152_2.00
Nematostella vectensis
NTAATDNNN
NNNHATTAN
PBM
Weirauch et al.(2014)
pTH5477
0.706
0.404
CBG04010
M01242_2.00
Caenorhabditis briggsae
NNKTAATDDMN
NKHHATTAMNN
PBM
Lambert et al.(2019)
pTH11489
0.695
0.667
Isl2
M00458_2.00
Mus musculus
NWDWDNN
NNHWHWN
PBM
Berger et al.(2008)
Isl2_3430
0.674
0.649
ISL2
M03177_2.00
Homo sapiens
YTAAKTGB
VCAMTTAR
SELEX
Jolma et al.(2013)
ISL2_1
0.674
0.649
ISL1
M04908_2.00
Homo sapiens
BTAAKTGS
SCAMTTAV
SELEX
Yin et al.(2017)
ISL1_eDBD_HT-SELEX
0.674
0.649
ISL1
M04910_2.00
Homo sapiens
NTAAKTGS
SCAMTTAN
SELEX
Yin et al.(2017)
ISL1_FL_HT-SELEX
0.674
0.649
ISL2
M05204_2.00
Homo sapiens
NTAAKTGS
SCAMTTAN
SELEX
Yin et al.(2017)
ISL2_eDBD_HT-SELEX
0.674
0.649
ISL1
M09128_2.00
Homo sapiens
NYWRAKKGV
BCMMTYWRN
Misc
Kulakovskiy et al.(2013)
ISL1_HUMAN.H11MO.0.A
0.674
0.649
Isl1
M09209_2.00
Mus musculus
NYWRAKKGV
BCMMTYWRN
Misc
Kulakovskiy et al.(2013)
ISL1_MOUSE.H11MO.0.A
0.674
0.649
Isl1
M09578_2.00
Mus musculus
YTAAKKGV
BCMMTTAR
Misc
Heinz et al.(2010)
Neuron-Isl1_GSE31456
0.674
0.649
ISL1
M10634_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL1_Q3
0.674
0.649
ISL1
M10635_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL1_Q6
0.674
0.649
ISL2B_ONCTS
M10798_2.00
Oncorhynchus tshawytscha
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_02
0.674
0.649
ISL2B_ONCTS
M10799_2.00
Oncorhynchus tshawytscha
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_03
0.674
0.649
ISL2B_ONCTS
M10800_2.00
Oncorhynchus tshawytscha
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_04
0.674
0.649
ISL2B_ONCTS
M10801_2.00
Oncorhynchus tshawytscha
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_05
0.674
0.649
ISL1
M04909_2.00
Homo sapiens
BTAAKTGS
SCAMTTAV
SELEX
Yin et al.(2017)
ISL1_eDBD_Methyl-HT-SELEX
0.674
0.649
ISL1
M04911_2.00
Homo sapiens
BTAAKTGS
SCAMTTAV
SELEX
Yin et al.(2017)
ISL1_FL_Methyl-HT-SELEX
0.674
0.649
ISL2
M05205_2.00
Homo sapiens
NTAAKTGN
NCAMTTAN
SELEX
Yin et al.(2017)
ISL2_eDBD_Methyl-HT-SELEX
0.674
0.649
tup
M06498_2.00
Drosophila melanogaster
WTAATKG
CMATTAW
B1H
Mathelier et al.(2014)
MA0248.1
0.672
0.632
tup
M06270_2.00
Drosophila melanogaster
SWTAATKG
CMATTAWS
B1H
Zhu et al.(2011)
Tup_Cell_FBgn0003896
0.672
0.632
tup
M06271_2.00
Drosophila melanogaster
NYTAATKRV
BYMATTARN
B1H
Zhu et al.(2011)
tup_SOLEXA_10_FBgn0003896
0.672
0.632
tup
M06272_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Tup_SOLEXA_FBgn0003896
0.672
0.632
CG18599
M06539_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Mathelier et al.(2014)
MA0177.1
0.648
0.316
CG18599
M06354_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592
0.648
0.316
CG18599
M06355_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592
0.648
0.316
NEMVEDRAFT_v1g205636
M02150_2.00
Nematostella vectensis
NTAATTAN
NTAATTAN
PBM
Weirauch et al.(2014)
pTH5491
0.643
0.333
NEMVEDRAFT_v1g8907
M02154_2.00
Nematostella vectensis
NTAATDRNNN
NNNYHATTAN
PBM
Weirauch et al.(2014)
pTH6483
0.631
0.333
PHOX2B
M00278_2.00
Homo sapiens
NNNNNRY
RYNNNNN
PBM
Barrera et al.(2016)
PHOX2B_Q143R
0.608
0.368
NOTO
M03241_2.00
Homo sapiens
NNTAATKWRN
NYWMATTANN
SELEX
Jolma et al.(2013)
NOTO_1
0.600
0.333
NOTO
M05390_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
NOTO_eDBD_HT-SELEX
0.600
0.333
NOTO
M05391_2.00
Homo sapiens
BTMATKRV
BYMATKAV
SELEX
Yin et al.(2017)
NOTO_eDBD_Methyl-HT-SELEX
0.600
0.333
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc01814
Homeodomain
92
148
QRIRTVLNESQLRLLEHSYSTNQRPDTSIKEQLIEQTGLSAGVIRVWFQNKRIKDKM
Links
Other
Homeodomain
family TFs
Other
Meloidogyne incognita
TFs
439 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000010458
Ailuropoda melanoleuca
ENSAMEG00000010458
I
0.000
GLI4
Canis familiaris
ENSCAFG00000029287
I
0.000
ENSCSAG00000009125
Chlorocebus sabaeus
ENSCSAG00000009125
I
0.000
GLI4
Homo sapiens
ENSG00000250571
D
0.000
ENSSTOG00000023930
Ictidomys tridecemlineatus
ENSSTOG00000023930
I
0.000
GLI4
Monodelphis domestica
ENSMODG00000011659
I
0.000
ENSMPUG00000008492
Mustela putorius furo
ENSMPUG00000008492
I
0.000
GLI4
Pan troglodytes
ENSPTRG00000020650
I
0.000
ENSPPYG00000018931
Pongo abelii
ENSPPYG00000018931
I
0.000
GLI4
Procavia capensis
ENSPCAG00000018803
I
0.000
GLI4
Pteropus vampyrus
ENSPVAG00000024242
I
0.000
ENSSSCG00000006960
Sus scrofa
ENSSSCG00000006960
I
0.000
GLI4
Tursiops truncatus
ENSTTRG00000021363
I
0.000