PDK_20s1343321g001 (Phoenix dactylifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 PDK_20s1343321g001 T231002_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.857 0.929
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.857 0.929
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.833 0.857
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.813 0.786
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.813 0.786
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.813 0.786
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.813 0.786
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.796 0.768
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.796 0.768
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.796 0.768
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.796 0.768
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.796 0.750
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.796 0.750
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.796 0.750
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.796 0.750
ATHB-21
M06907_2.00 		Arabidopsis thaliana
NNWHCAATWATTDN
NHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB21_col_a 		0.738 0.643
ATHB-21
M06908_2.00 		Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN
NNAHCAATWATTDNNNHHWW		 Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a 		0.738 0.643
HB-5
M06924_2.00 		Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH
DWWDNNNHMAATWATTGDTNN		 Dap-seq
OMalley et al.(2016)
ATHB40_col_a 		0.736 0.607
HB-5
M06925_2.00 		Arabidopsis thaliana
HHAATWATTGDWNN
NNWHCAATWATTDD		 Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a 		0.736 0.607
ATHB-53
M06934_2.00 		Arabidopsis thaliana
HMAATAATTRD
HYAATTATTKD		 Dap-seq
OMalley et al.(2016)
ATHB53_col_a 		0.731 0.571
ATHB-53
M06935_2.00 		Arabidopsis thaliana
NNWHCAATWATTDDN
NHHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a 		0.731 0.571
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.727 0.893
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.727 0.893
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.702 0.821
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.702 0.821
ATHB-7
M02043_2.00 		Arabidopsis thaliana
NHWTGATTGN
NCAATCAWDN		 PBM
Weirauch et al.(2014)
pTH8090 		0.600 0.607
ATHB-7
M06911_2.00 		Arabidopsis thaliana
NHYCAATCATTSW
WSAATGATTGRDN		 Dap-seq
OMalley et al.(2016)
ATHB7_col_a 		0.600 0.607
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1343321g001 Homeodomain 33 88

Links

Other Homeodomain family TFs
Other Phoenix dactylifera TFs

819 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI086517 Acyrthosiphon pisum ACYPI086517 N
Alligator_sinensis_CCG001661.1 Alligator sinensis Alligator_sinensis_CCG001661.1 I
Alligator_sinensis_CCG004967.1 Alligator sinensis Alligator_sinensis_CCG004967.1 N
Alligator_sinensis_CCG010660.1 Alligator sinensis Alligator_sinensis_CCG010660.1 N
ENSAPLG00000001459 Anas platyrhynchos ENSAPLG00000001459 I
ANCCAN_11756 Ancylostoma caninum ANCCAN_11756 N
ANCCAN_12383 Ancylostoma caninum ANCCAN_12383 N
ANCCAN_18983 Ancylostoma caninum ANCCAN_18983 N
ANCCAN_23849 Ancylostoma caninum ANCCAN_23849 N
ANCCAN_27026 Ancylostoma caninum ANCCAN_27026 N
ANCCEY_10591 Ancylostoma ceylanicum ANCCEY_10591 N
ANCCEY_10891 Ancylostoma ceylanicum ANCCEY_10891 N
ANCDUO_04800 Ancylostoma duodenale ANCDUO_04800 N
ANCDUO_09320 Ancylostoma duodenale ANCDUO_09320 N
ACAC_0000093601 Angiostrongylus cantonensis ACAC_0000093601 N
ACOC_0000334101 Angiostrongylus costaricensis ACOC_0000334101 N
ASIM_0000060401 Anisakis simplex ASIM_0000060401 N
ASIM_0000175201 Anisakis simplex ASIM_0000175201 N
ASIM_0000357501 Anisakis simplex ASIM_0000357501 N
ASIM_0001450801 Anisakis simplex ASIM_0001450801 N
AARA003138 Anopheles arabiensis AARA003138 N
AARA005137 Anopheles arabiensis AARA005137 N
AARA011782 Anopheles arabiensis AARA011782 I
AATE009299 Anopheles atroparvus AATE009299 I
AATE015217 Anopheles atroparvus AATE015217 N
ACHR008505 Anopheles christyi ACHR008505 N
ACOM035026 Anopheles coluzzii ACOM035026 N
ACOM036085 Anopheles coluzzii ACOM036085 N
ACUA020431 Anopheles culicifacies ACUA020431 N
ADAC000821 Anopheles darlingi ADAC000821 N
AEPI002459 Anopheles epiroticus AEPI002459 N
AEPI010384 Anopheles epiroticus AEPI010384 N
AFAF004701 Anopheles farauti AFAF004701 N
AMAM004568 Anopheles maculatus AMAM004568 N
AMAM018190 Anopheles maculatus AMAM018190 I
AMEM007254 Anopheles merus AMEM007254 N
AMIN006246 Anopheles minimus AMIN006246 N
AQUA010391 Anopheles quadriannulatus AQUA010391 I
ASIS018446 Anopheles sinensis ASIS018446 N
ASIS021849 Anopheles sinensis ASIS021849 N
Afo_R002867 Aptenodytes forsteri Afo_R002867 I
Afo_R002868 Aptenodytes forsteri Afo_R002868 I
Afo_R012244 Aptenodytes forsteri Afo_R012244 N
ENSAMXG00000008007 Astyanax mexicanus ENSAMXG00000008007 I
ACEP24283 Atta cephalotes ACEP24283 N
BGLB006778 Biomphalaria glabrata BGLB006778 N
BGLB007714 Biomphalaria glabrata BGLB007714 N
BGLB007719 Biomphalaria glabrata BGLB007719 N
BGLB007768 Biomphalaria glabrata BGLB007768 N
BGLB011885 Biomphalaria glabrata BGLB011885 N
BGLB012524 Biomphalaria glabrata BGLB012524 N
BGIBMGA003265 Bombyx mori BGIBMGA003265 N
BGIBMGA006390 Bombyx mori BGIBMGA006390 I
BGIBMGA008456 Bombyx mori BGIBMGA008456 I
e_gw.11.656.1 Branchiostoma floridae e_gw.11.656.1 N
BTMF_0000546301 Brugia timori BTMF_0000546301 N
Brh_R008378 Buceros rhinoceros Brh_R008378 I
CBG05223 Caenorhabditis briggsae CBG05223 N
ARX Callithrix jacchus ENSCJAG00000004737 N
Aan_R001812 Calypte anna Aan_R001812 N
Aan_R007134 Calypte anna Aan_R007134 I
Aan_R008815 Calypte anna Aan_R008815 N
Cflo_00859--XP_394119.2_APIME Camponotus floridanus Cflo_00859--XP_394119.2_APIME N
HOXB3 Canis familiaris ENSCAFG00000028513 I
CapteG142082 Capitella teleta CapteG142082 N
CapteG199535 Capitella teleta CapteG199535 N
Cmyd_10005403 Chelonia mydas Cmyd_10005403 I
Cmyd_10012338 Chelonia mydas Cmyd_10012338 N
ENSCSAG00000006765 Chlorocebus sabaeus ENSCSAG00000006765 N
CLEC004114 Cimex lectularius CLEC004114 N
ENSCING00000011826 Ciona intestinalis ENSCING00000011826 N
CGI_10026625 Crassostrea gigas CGI_10026625 N
CGOC_0001035201 Cylicostephanus goldi CGOC_0001035201 N
KGM_05066 Danaus plexippus KGM_05066 N
KGM_13123 Danaus plexippus KGM_13123 N
KGM_15359 Danaus plexippus KGM_15359 N
KGM_21794 Danaus plexippus KGM_21794 I
DAPPUDRAFT_50954 Daphnia pulex DAPPUDRAFT_50954 N
HOXC13 Dasypus novemcinctus ENSDNOG00000048301 N
DICVIV_05002 Dictyocaulus viviparus DICVIV_05002 N
DICVIV_09128 Dictyocaulus viviparus DICVIV_09128 N
DILT_0000613101 Diphyllobothrium latum DILT_0000613101 N
nDi.2.2.2.g10376 Dirofilaria immitis nDi.2.2.2.g10376 N
nDi.2.2.2.g10679 Dirofilaria immitis nDi.2.2.2.g10679 I
DME_0000044501 Dracunculus medinensis DME_0000044501 N
DME_0000045101 Dracunculus medinensis DME_0000045101 N
DME_0000947201 Dracunculus medinensis DME_0000947201 N
GI23625 Drosophila mojavensis FBgn0146351 N
GM17434 Drosophila sechellia FBgn0172344 I
ECPE_0000850801 Echinostoma caproni ECPE_0000850801 N
ENSECAG00000017919 Equus caballus ENSECAG00000017919 I
HMX2 Felis catus ENSFCAG00000023440 N
ENSFCAG00000025984 Felis catus ENSFCAG00000025984 N
ENSGMOG00000017864 Gadus morhua ENSGMOG00000017864 N
DLX1 Gallus gallus ENSGALG00000018439 I
hoxc12a Gasterosteus aculeatus ENSGACG00000009391 N
GPLIN_000113000 Globodera pallida GPLIN_000113000 N
GPLIN_000138000 Globodera pallida GPLIN_000138000 N
GPLIN_000838600 Globodera pallida GPLIN_000838600 N
GLYMA08G09430 Glycine max GLYMA08G09430 N
GPUH_0001146601 Gongylonema pulchrum GPUH_0001146601 N
GPUH_0002138601 Gongylonema pulchrum GPUH_0002138601 N
HHAL004742-PA Halyomorpha halys HHAL004742-PA N
HHAL009617-PA Halyomorpha halys HHAL009617-PA N
HMEL002756 Heliconius melpomene HMEL002756 N
HMEL003744 Heliconius melpomene HMEL003744 N
HMEL010247 Heliconius melpomene HMEL010247 N
HMEL016138 Heliconius melpomene HMEL016138 N
HPBE_0002029201 Heligmosomoides bakeri HPBE_0002029201 N
HPBE_0002330201 Heligmosomoides bakeri HPBE_0002330201 N
HPBE_0002651601 Heligmosomoides bakeri HPBE_0002651601 N
HelroG147601 Helobdella robusta HelroG147601 I
HelroG148863 Helobdella robusta HelroG148863 N
HelroG92822 Helobdella robusta HelroG92822 N
Hba_17357 Heterorhabditis bacteriophora Hba_17357 N
BARX1 Homo sapiens ENSG00000131668 D
TTAC_0000146101 Hydatigera taeniaeformis TTAC_0000146101 N
HNAJ_0000607701 Hymenolepis nana HNAJ_0000607701 N
HNAJ_0000873601 Hymenolepis nana HNAJ_0000873601 N
LDEC016573 Leptinotarsa decemlineata LDEC016573 N
VAX1 Loxodonta africana ENSLAFG00000018107 N
LCUP010920 Lucilia cuprina LCUP010920 N
LCUP011770 Lucilia cuprina LCUP011770 N
LLOJ003466 Lutzomyia longipalpis LLOJ003466 N
LLOJ004702 Lutzomyia longipalpis LLOJ004702 N
MESCA011418 Megaselia scalaris MESCA011418 N
HOXB3 Meleagris gallopavo ENSMGAG00000002541 N
ENSMGAG00000010685 Meleagris gallopavo ENSMGAG00000010685 I
MCINX012038 Melitaea cinxia MCINX012038 N
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 N
maker-nMf.1.1.scaf05303-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05303-snap-gene-0.8 N
MhA1_Contig121.frz3.gene75 Meloidogyne hapla MhA1_Contig121.frz3.gene75 N
Minc02159 Meloidogyne incognita Minc02159 N
Minc07807 Meloidogyne incognita Minc07807 N
Minc16530 Meloidogyne incognita Minc16530 N
RAX2 Microcebus murinus ENSMICG00000014768 I
Myotis_brandtii_Barx2_10007775 Myotis brandtii Myotis_brandtii_Barx2_10007775 N
ENSMLUG00000022220 Myotis lucifugus ENSMLUG00000022220 N
NECAME_04746 Necator americanus NECAME_04746 N
NECAME_11765 Necator americanus NECAME_11765 N
NECAME_15451 Necator americanus NECAME_15451 N
NECAME_16917 Necator americanus NECAME_16917 N
NEMVEDRAFT_v1g101680 Nematostella vectensis NEMVEDRAFT_v1g101680 N
NEMVEDRAFT_v1g128275 Nematostella vectensis NEMVEDRAFT_v1g128275 N
NEMVEDRAFT_v1g128296 Nematostella vectensis NEMVEDRAFT_v1g128296 N
NEMVEDRAFT_v1g150519 Nematostella vectensis NEMVEDRAFT_v1g150519 N
NBR_0000086301 Nippostrongylus brasiliensis NBR_0000086301 N
ENSNLEG00000000365 Nomascus leucogenys ENSNLEG00000000365 N
Ocbimv22010205m.g Octopus bimaculoides Ocbimv22010205m.g N
Ocbimv22024994m.g Octopus bimaculoides Ocbimv22024994m.g N
SNAPOd2T00002147001 Oikopleura dioica SNAPOd2T00002147001 N
OFLC_0000421701 Onchocerca flexuosa OFLC_0000421701 N
OFLC_0001211001 Onchocerca flexuosa OFLC_0001211001 N
nOo.2.0.1.g09403 Onchocerca ochengi nOo.2.0.1.g09403 N
Ogr05500 Ophisaurus gracilis Ogr05500 N
Ogr09559 Ophisaurus gracilis Ogr09559 N
Ogr19002 Ophisaurus gracilis Ogr19002 N
T265_14387 Opisthorchis viverrini T265_14387 N
BARX2 Ornithorhynchus anatinus ENSOANG00000000573 N
ENSOANG00000007304 Ornithorhynchus anatinus ENSOANG00000007304 I
ENSOANG00000007774 Ornithorhynchus anatinus ENSOANG00000007774 N
BSX Ornithorhynchus anatinus ENSOANG00000010303 N
ENSOCUG00000013528 Oryctolagus cuniculus ENSOCUG00000013528 I
GBX2 Oryzias latipes ENSORLG00000001376 I
HOXB2 Pan troglodytes ENSPTRG00000009352 I
PEQ_0000993201 Parascaris equorum PEQ_0000993201 N
PHUM265030 Pediculus humanus PHUM265030 I
ENSPSIG00000004928 Pelodiscus sinensis ENSPSIG00000004928 N
ENSPSIG00000017365 Pelodiscus sinensis ENSPSIG00000017365 N
ENSPMAG00000008178 Petromyzon marinus ENSPMAG00000008178 N
ENSPMAG00000008834 Petromyzon marinus ENSPMAG00000008834 N
PPAI007203 Phlebotomus papatasi PPAI007203 N
scaffold493-EXSNAP2012.8 Pristionchus exspectatus scaffold493-EXSNAP2012.8 N
scaffold958-EXSNAP2012.2 Pristionchus exspectatus scaffold958-EXSNAP2012.2 N
PXEA_0000638901 Protopolystoma xenopodis PXEA_0000638901 N
PXEA_0002744701 Protopolystoma xenopodis PXEA_0002744701 N
ENSPVAG00000007998 Pteropus vampyrus ENSPVAG00000007998 N
LOC100912608 Rattus norvegicus ENSRNOG00000050252 I
RPRC010976 Rhodnius prolixus RPRC010976 I
nRc.2.0.1.g40851 Romanomermis culicivorax nRc.2.0.1.g40851 N
ENSSHAG00000002450 Sarcophilus harrisii ENSSHAG00000002450 N
ENSSHAG00000011988 Sarcophilus harrisii ENSSHAG00000011988 I
SSLN_0000633001 Schistocephalus solidus SSLN_0000633001 N
A_05714 Schistosoma haematobium A_05714 N
B_00147 Schistosoma haematobium B_00147 N
Sjc_0051970 Schistosoma japonicum Sjc_0051970 N
Smp_136900 Schistosoma mansoni Smp_136900 N
Smp_169500 Schistosoma mansoni Smp_169500 N
SMTD_0001030501 Schistosoma mattheei SMTD_0001030501 N
SMTD_0001153001 Schistosoma mattheei SMTD_0001153001 N
SBAD_0000398601 Soboliphyme baturini SBAD_0000398601 N
SBAD_0000495201 Soboliphyme baturini SBAD_0000495201 N
SPER_0001567701 Spirometra erinaceieuropaei SPER_0001567701 N
SPER_0001728701 Spirometra erinaceieuropaei SPER_0001728701 N
SPER_0002183801 Spirometra erinaceieuropaei SPER_0002183801 N
SPER_0003632001 Spirometra erinaceieuropaei SPER_0003632001 N
SPER_0003833401 Spirometra erinaceieuropaei SPER_0003833401 N
SPAL_0000530600 Strongyloides papillosus SPAL_0000530600 N
ENSTGUG00000000339 Taeniopygia guttata ENSTGUG00000000339 N
ENSTGUG00000011379 Taeniopygia guttata ENSTGUG00000011379 I
ENSTSYG00000005123 Tarsius syrichta ENSTSYG00000005123 N
TCNE_0000266601 Toxocara canis TCNE_0000266601 N
TCNE_0000939301 Toxocara canis TCNE_0000939301 N
TRE_0000179101 Trichobilharzia regenti TRE_0000179101 N
Tal_R004953 Tyto alba Tal_R004953 N
Tal_R008067 Tyto alba Tal_R008067 I
ENSVPAG00000010060 Vicugna pacos ENSVPAG00000010060 I
WUBG_02755 Wuchereria bancrofti WUBG_02755 N
WUBG_09511 Wuchereria bancrofti WUBG_09511 N
WUBG_18725 Wuchereria bancrofti WUBG_18725 N
1703276C Xenopus laevis 1703276C N
1703276D Xenopus laevis 1703276D I
AAA49750 Xenopus laevis AAA49750 N
CAA41845 Xenopus laevis CAA41845 N
CAA41846 Xenopus laevis CAA41846 I
hoxb2.S Xenopus laevis XB-GENE-478530 I
hoxa11.S Xenopus laevis XB-GENE-483246 I
hoxc6.S Xenopus laevis XB-GENE-865143 I
ENSXMAG00000013191 Xiphophorus maculatus ENSXMAG00000013191 N
L798_03158 Zootermopsis nevadensis L798_03158 N