AARA001944 (Anopheles arabiensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 AARA001944 T231168_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.766 0.578
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.766 0.578
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.766 0.578
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.766 0.578
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.766 0.578
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.766 0.578
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.766 0.578
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.766 0.578
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.766 0.578
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.742 0.356
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.742 0.356
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.742 0.356
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AARA001944-PA Homeodomain 22 66

Links

Other Homeodomain family TFs
Other Anopheles arabiensis TFs

1240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_32964 Aegilops tauschii F775_32964 N 0.000
MLOC_71715 Hordeum vulgare MLOC_71715 N 0.000
LPERR07G15880 Leersia perrieri LPERR07G15880 N 0.000
OBART07G18420 Oryza barthii OBART07G18420 N 0.000
OB07G24200 Oryza brachyantha OB07G24200 N 0.000
ORGLA07G0148500 Oryza glaberrima ORGLA07G0148500 N 0.000
OGLUM07G18220 Oryza glumaepatula OGLUM07G18220 N 0.000
BGIOSGA025935 Oryza indica BGIOSGA025935 N 0.000
OLONG_006976 Oryza longistaminata OLONG_006976 N 0.000
OMERI07G15310 Oryza meridionalis OMERI07G15310 N 0.000
ONIVA07G16850 Oryza nivara ONIVA07G16850 N 0.000
OPUNC07G17320 Oryza punctata OPUNC07G17320 N 0.000
ORUFI07G19160 Oryza rufipogon ORUFI07G19160 N 0.000
OS07G0557500 Oryza sativa OS07G0557500 N 0.000
Pavir.Bb03053 Panicum virgatum Pavir.Bb03053 N 0.000
Pavir.J31665 Panicum virgatum Pavir.J31665 N 0.000
Si029184m.g Setaria italica Si029184m.g N 0.000
Sb02g036200 Sorghum bicolor Sb02g036200 N 0.000
Traes_2AS_E9BB50170 Triticum aestivum Traes_2AS_E9BB50170 N 0.000
Traes_2BS_3ADAEBB61 Triticum aestivum Traes_2BS_3ADAEBB61 N 0.000
Traes_2DS_9DC4D07BB Triticum aestivum Traes_2DS_9DC4D07BB N 0.000
Traes_6BL_7462E6F9B Triticum aestivum Traes_6BL_7462E6F9B I 0.000
GRMZM2G415012 Zea mays GRMZM2G415012 N 0.000
GRMZM2G108272 Zea mays GRMZM2G108272 N 0.000
GRMZM2G032071 Zea mays GRMZM2G032071 N 0.000